Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G524400.1 | Wheat | plastid | 76.74 | 34.86 |
| GSMUA_Achr5P18420_001 | Banana | cytosol | 50.39 | 26.21 |
| Solyc01g068620.2.1 | Tomato | nucleus | 44.19 | 19.66 |
| KRH33686 | Soybean | plastid | 41.09 | 19.49 |
| AT4G01650.1 | Thale cress | plastid | 43.41 | 19.44 |
| VIT_07s0005g02400.t01 | Wine grape | plastid | 42.64 | 19.3 |
| Bra000919.1-P | Field mustard | plastid | 41.86 | 18.95 |
| CDX74389 | Canola | plastid | 41.86 | 18.95 |
| CDX91843 | Canola | plastid | 41.86 | 18.95 |
| Bra036320.1-P | Field mustard | plastid | 40.31 | 18.06 |
| CDY07128 | Canola | plastid | 40.31 | 17.93 |
| CDY58222 | Canola | plastid | 41.09 | 17.21 |
| TraesCS4A01G353400.1 | Wheat | plastid | 17.83 | 3.18 |
| PGSC0003DMT400037743 | Potato | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G524300.1 | EnsemblPlantsGene:TraesCS3A01G524300 | Gene3D:3.30.530.20 | InterPro:COQ10_START | InterPro:IPR023393 | InterPro:START-like_dom_sf |
| ncoils:Coil | PANTHER:PTHR34060 | PANTHER:PTHR34060:SF1 | PFAM:PF03364 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3A:-:739275669..739276480
Molecular Weight (calculated)
14760.9 Da
IEP (calculated)
4.704
GRAVY (calculated)
-0.298
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVQVREQY LTLGLKFNAK GAIECYKGEM EVLLESRARC RETAFNMIDG DFKVFQGKWS VQEVDATTDE GGEVPISQEF QTMLSYVVEL EPKLWVPVRL
101: LEGRICKEIK TNLVCIREEA ERVQRLQGG
101: LEGRICKEIK TNLVCIREEA ERVQRLQGG
001: MSIRAQEIQT LEDGKTEELV VGDDGVLIEL KKLEKSSRRI RSKIGMEASL DSVWSVLTDY EKLSDFIPGL VVSELVEKEG NRVRLFQMGQ QNLALGLKFN
101: AKAVLDCYEK ELEVLPHGRR REIDFKMVEG DFQLFEGKWS IEQLDKGIHG EALDLQFKDF RTTLAYTVDV KPKMWLPVRL VEGRLCKEIR TNLMSIRDAA
201: QKVIEGVIHD L
101: AKAVLDCYEK ELEVLPHGRR REIDFKMVEG DFQLFEGKWS IEQLDKGIHG EALDLQFKDF RTTLAYTVDV KPKMWLPVRL VEGRLCKEIR TNLMSIRDAA
201: QKVIEGVIHD L
Arabidopsis Description
Polyketide cyclase / dehydrase and lipid transport protein [Source:UniProtKB/TrEMBL;Acc:Q9M120]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.