CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53261	Soybean	nucleus	95.32	96.55
KRH18706	Soybean	nucleus	60.43	66.67
VIT_18s0001g02540.t01	Wine grape	nucleus	58.3	59.05
GSMUA_Achr11P...	Banana	nucleus	45.96	58.38
KRH53721	Soybean	cytosol	31.91	55.15
GSMUA_Achr11P...	Banana	nucleus	42.13	54.7
GSMUA_AchrUn_...	Banana	nucleus	45.96	54.0
TraesCS4B01G178900.1	Wheat	cytosol	32.34	53.9
KRH30056	Soybean	nucleus	42.55	53.48
GSMUA_Achr3P08680_001	Banana	cytosol	42.98	53.44
KRH13391	Soybean	nucleus	40.43	53.07
GSMUA_Achr5P08230_001	Banana	nucleus	43.4	52.85
KRH64213	Soybean	cytosol	32.77	52.74
KRH20737	Soybean	nucleus	39.57	51.96
KRH62857	Soybean	nucleus	40.0	50.81
Os12t0139400-01	Rice	nucleus	42.55	49.75
KXG27703	Sorghum	nucleus	42.55	49.51
Os11t0143300-02	Rice	cytosol	42.55	48.08
Os01t0952500-01	Rice	cytosol	45.96	46.55
TraesCS5D01G140200.1	Wheat	nucleus	43.83	44.59
TraesCS5B01G132900.2	Wheat	cytosol	43.83	44.4
Zm00001d011849_P002	Maize	cytosol	42.98	43.35
TraesCS5A01G131600.2	Wheat	nucleus	43.4	42.86
KRH63457	Soybean	cytosol	37.02	42.65
Zm00001d023242_P001	Maize	nucleus	25.11	42.45
KRH54462	Soybean	cytosol	36.6	42.16
EES02064	Sorghum	cytosol	43.83	42.04
KRG95133	Soybean	nucleus	43.83	41.87
Zm00001d052476_P001	Maize	nucleus	21.7	41.8
HORVU5Hr1G043090.1	Barley	nucleus	43.4	41.8
TraesCS3B01G548600.1	Wheat	cytosol	42.55	41.67
KRH66808	Soybean	nucleus	43.83	41.53
KRH57009	Soybean	nucleus	37.02	41.23
KRH03376	Soybean	nucleus	36.17	41.06
HORVU3Hr1G108540.2	Barley	nucleus	42.13	39.92
KRH45761	Soybean	nucleus	37.45	39.46
KRG99225	Soybean	nucleus	37.02	39.19
TraesCS3D01G494600.1	Wheat	nucleus	42.55	37.17
KRH69443	Soybean	nucleus	35.74	35.0
KXG22820	Sorghum	endoplasmic reticulum	41.28	34.77
KRH74701	Soybean	nucleus	35.74	34.43
GSMUA_Achr8P09640_001	Banana	cytosol	25.53	34.09

Protein Annotations

EntrezGene:100801334	MapMan:11.4.2.5	Gene3D:3.40.50.2300	EMBL:ACUP02002770	InterPro:CheY-like_superfamily	EnsemblPlantsGene:GLYMA_04G247800
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	UniProt:I1JZ41	InterPro:IPR001789	EnsemblPlants:KRH64643	ProteinID:KRH64643
ProteinID:KRH64643.1	PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF29	SMART:SM00448
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000233A227	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:51500820..51504612

Molecular Weight (calculated)

26478.3 Da

IEP (calculated)

5.179

GRAVY (calculated)

-0.702

Length

235 amino acids

Sequence
(BLAST)

001: MEFVDTRKLQ LQHQQQLQQQ PQHFHVLAVD DSVIDRKLLE RLLRGSSCKV TCVDSGDKAL KYLGLIDELD DTSSTSLESE SSHPPPQPLQ REGIKVNLIM
101: TDYCMPGMSG YDLLKRVKGS SWKDVPVVIM SSENVPSRIS MCLEEGAEEF LLKPLQLSDL DKLQPYFLKS VDNSCEKESA NSSIDSDNDN VINNNSNNSN
201: SNNNNNNSIS KRKAMSPEPH REERSRPKMK ELAVV

Best Arabidopsis Sequence Match ( AT2G41310.1 )
(BLAST)

001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV

Arabidopsis Description

ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.