Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000224.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY22518 | Canola | nucleus | 96.76 | 96.31 |
| CDY06934 | Canola | cytosol | 88.43 | 86.04 |
| AT2G41310.1 | Thale cress | nucleus | 89.35 | 85.78 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 87.96 | 85.59 |
| CDX79942 | Canola | nucleus | 85.19 | 85.58 |
| CDY23856 | Canola | nucleus | 84.72 | 85.12 |
| CDY65526 | Canola | cytosol | 57.41 | 78.48 |
| CDX76036 | Canola | nucleus | 73.15 | 70.22 |
| CDY30966 | Canola | cytosol | 73.61 | 68.53 |
| CDX72077 | Canola | cytosol | 73.15 | 67.23 |
| CDX67674 | Canola | cytosol | 70.83 | 65.38 |
| CDY06142 | Canola | cytosol | 71.3 | 65.25 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 52.31 | 59.79 |
| PGSC0003DMT400076758 | Potato | nucleus | 62.5 | 59.73 |
| GSMUA_Achr11P... | Banana | nucleus | 50.0 | 58.38 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 51.85 | 58.03 |
| PGSC0003DMT400076726 | Potato | nucleus | 60.65 | 57.96 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 58.33 | 57.8 |
| Solyc10g079600.1.1 | Tomato | nucleus | 60.65 | 57.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.24 | 57.5 |
| PGSC0003DMT400007618 | Potato | nucleus | 56.94 | 57.48 |
| GSMUA_Achr11P... | Banana | nucleus | 47.69 | 56.91 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 37.04 | 56.74 |
| Os12t0139400-01 | Rice | nucleus | 51.85 | 55.72 |
| KRG95133 | Soybean | nucleus | 62.04 | 54.47 |
| KRH66808 | Soybean | nucleus | 62.5 | 54.44 |
| Solyc10g079700.1.1 | Tomato | nucleus | 59.72 | 53.97 |
| Os11t0143300-02 | Rice | cytosol | 51.85 | 53.85 |
| KXG27703 | Sorghum | nucleus | 49.07 | 52.48 |
| Os01t0952500-01 | Rice | cytosol | 55.09 | 51.29 |
| CDY71200 | Canola | cytosol | 30.09 | 51.18 |
| CDY59626 | Canola | cytosol | 30.09 | 51.18 |
| CDX75990 | Canola | cytosol | 30.09 | 51.18 |
| CDX72141 | Canola | cytosol | 29.63 | 50.39 |
| EES02064 | Sorghum | cytosol | 56.94 | 50.2 |
| Zm00001d011849_P002 | Maize | cytosol | 53.7 | 49.79 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 41.2 | 49.72 |
| CDY36905 | Canola | nucleus | 41.67 | 49.18 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 41.67 | 49.18 |
| CDY70164 | Canola | nucleus | 41.67 | 49.18 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 52.31 | 48.92 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 41.67 | 48.91 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 41.2 | 48.63 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 51.85 | 48.28 |
| CDY22469 | Canola | cytosol | 35.19 | 48.1 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 53.24 | 47.92 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 51.39 | 46.64 |
| CDY35445 | Canola | cytosol | 34.72 | 46.58 |
| Zm00001d023242_P001 | Maize | nucleus | 29.63 | 46.04 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 52.31 | 45.56 |
| CDX84366 | Canola | nucleus | 39.81 | 45.26 |
| CDY00336 | Canola | nucleus | 39.81 | 45.26 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 37.04 | 45.2 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 50.93 | 45.08 |
| CDX96681 | Canola | cytosol | 42.59 | 44.44 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 34.72 | 44.38 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 37.5 | 44.02 |
| CDX83788 | Canola | cytosol | 42.59 | 43.4 |
| CDY26701 | Canola | nucleus | 41.2 | 41.78 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 51.85 | 41.64 |
| CDY41014 | Canola | nucleus | 40.74 | 41.12 |
| CDX68161 | Canola | cytosol | 37.5 | 41.12 |
| Zm00001d052476_P001 | Maize | nucleus | 22.69 | 40.16 |
| CDY45155 | Canola | nucleus | 42.13 | 39.91 |
| CDY30913 | Canola | nucleus | 42.13 | 38.24 |
| CDY20630 | Canola | nucleus | 43.06 | 37.65 |
| KXG22820 | Sorghum | endoplasmic reticulum | 48.61 | 37.63 |
| CDY20948 | Canola | nucleus | 43.06 | 36.76 |
| CDY37975 | Canola | nucleus | 42.59 | 36.36 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 36.57 | 36.24 |
| CDY34890 | Canola | nucleus | 43.52 | 36.15 |
| CDX93424 | Canola | nucleus | 42.13 | 35.97 |
| CDY66046 | Canola | nucleus | 41.67 | 35.57 |
| CDY07801 | Canola | nucleus | 43.52 | 35.47 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 25.46 | 31.25 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078HDA8 | UniProt:A0A078HDA8 | EnsemblPlants:CDY35419 | ProteinID:CDY35419 |
| ProteinID:CDY35419.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00058410001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0002540347 | SEG:seg | : | : | : |
Description
BnaA03g19410DBnaA03g19410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDA8]
Coordinates
chrLK032351:-:254949..256184
Molecular Weight (calculated)
24276.1 Da
IEP (calculated)
4.645
GRAVY (calculated)
-0.482
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVVTESQFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALELLGL RESNESDDPN ATSTSPEVEI NLIITDYCMP GMTGYDLLKR VKESAAFRSI
101: PVVIMSSENV PARISRCLEE GAEEFFLKPV KLADLTKLKP HMMKTKLKKE SEKPAEEVKP EIEEEESPVI EILTLHQELE SEQQEPMLSN NKRKAMEEAI
201: STGRSRPKYN DITTSV
101: PVVIMSSENV PARISRCLEE GAEEFFLKPV KLADLTKLKP HMMKTKLKKE SEKPAEEVKP EIEEEESPVI EILTLHQELE SEQQEPMLSN NKRKAMEEAI
201: STGRSRPKYN DITTSV
001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
Arabidopsis Description
ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.