Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76036 | Canola | nucleus | 93.1 | 96.0 |
| CDY65526 | Canola | cytosol | 56.47 | 82.91 |
| CDY06142 | Canola | cytosol | 83.19 | 81.78 |
| CDX72077 | Canola | cytosol | 81.47 | 80.43 |
| CDX67674 | Canola | cytosol | 80.6 | 79.91 |
| AT3G57040.1 | Thale cress | nucleus | 76.29 | 75.64 |
| CDY35419 | Canola | nucleus | 68.53 | 73.61 |
| CDY22518 | Canola | nucleus | 67.67 | 72.35 |
| CDY23856 | Canola | nucleus | 66.38 | 71.63 |
| CDX79942 | Canola | nucleus | 65.95 | 71.16 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 67.67 | 70.72 |
| CDY06934 | Canola | cytosol | 67.24 | 70.27 |
| PGSC0003DMT400076758 | Potato | nucleus | 59.91 | 61.5 |
| Solyc10g079600.1.1 | Tomato | nucleus | 59.48 | 60.79 |
| PGSC0003DMT400076726 | Potato | nucleus | 59.05 | 60.62 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 56.9 | 60.55 |
| PGSC0003DMT400007618 | Potato | nucleus | 54.31 | 58.88 |
| GSMUA_Achr11P... | Banana | nucleus | 46.55 | 58.38 |
| Solyc10g079700.1.1 | Tomato | nucleus | 59.91 | 58.16 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 46.98 | 57.67 |
| KRH66808 | Soybean | nucleus | 61.21 | 57.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.14 | 57.0 |
| KRG95133 | Soybean | nucleus | 60.34 | 56.91 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 46.98 | 56.48 |
| GSMUA_Achr11P... | Banana | nucleus | 43.1 | 55.25 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 33.19 | 54.61 |
| Os12t0139400-01 | Rice | nucleus | 46.98 | 54.23 |
| Os11t0143300-02 | Rice | cytosol | 46.98 | 52.4 |
| KXG27703 | Sorghum | nucleus | 44.83 | 51.49 |
| Zm00001d011849_P002 | Maize | cytosol | 50.86 | 50.64 |
| CDY71200 | Canola | cytosol | 27.16 | 49.61 |
| CDY59626 | Canola | cytosol | 27.16 | 49.61 |
| CDX75990 | Canola | cytosol | 27.16 | 49.61 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 49.57 | 49.57 |
| Os01t0952500-01 | Rice | cytosol | 49.57 | 49.57 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 48.71 | 48.92 |
| CDX72141 | Canola | cytosol | 26.72 | 48.82 |
| CDY22469 | Canola | cytosol | 32.33 | 47.47 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 47.84 | 46.64 |
| CDY35445 | Canola | cytosol | 32.33 | 46.58 |
| EES02064 | Sorghum | cytosol | 49.14 | 46.53 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 35.34 | 45.81 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 35.34 | 44.81 |
| CDY70164 | Canola | nucleus | 35.34 | 44.81 |
| CDY36905 | Canola | nucleus | 35.34 | 44.81 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 46.98 | 44.67 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 45.69 | 44.17 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 34.91 | 44.02 |
| Zm00001d023242_P001 | Maize | nucleus | 26.29 | 43.88 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 34.48 | 43.72 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 33.19 | 43.5 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 31.47 | 43.2 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 34.05 | 42.93 |
| CDY00336 | Canola | nucleus | 34.91 | 42.63 |
| CDX84366 | Canola | nucleus | 34.91 | 42.63 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 45.26 | 42.34 |
| CDX96681 | Canola | cytosol | 37.07 | 41.55 |
| Zm00001d052476_P001 | Maize | nucleus | 21.55 | 40.98 |
| CDX83788 | Canola | cytosol | 37.07 | 40.57 |
| CDY26701 | Canola | nucleus | 36.64 | 39.91 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 45.26 | 39.03 |
| CDY41014 | Canola | nucleus | 35.78 | 38.78 |
| CDX68161 | Canola | cytosol | 32.76 | 38.58 |
| CDY45155 | Canola | nucleus | 37.5 | 38.16 |
| KXG22820 | Sorghum | endoplasmic reticulum | 44.83 | 37.28 |
| CDY30913 | Canola | nucleus | 37.5 | 36.55 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 27.16 | 35.8 |
| CDY20630 | Canola | nucleus | 37.93 | 35.63 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 32.76 | 34.86 |
| CDX93424 | Canola | nucleus | 37.93 | 34.78 |
| CDY20948 | Canola | nucleus | 37.93 | 34.78 |
| CDY37975 | Canola | nucleus | 37.93 | 34.78 |
| CDY66046 | Canola | nucleus | 37.5 | 34.39 |
| CDY34890 | Canola | nucleus | 38.36 | 34.23 |
| CDY07801 | Canola | nucleus | 38.36 | 33.58 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078GZN2 | UniProt:A0A078GZN2 | EnsemblPlants:CDY30966 | ProteinID:CDY30966 |
| ProteinID:CDY30966.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00046988001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EADE7B | SEG:seg | : | : | : |
Description
BnaC04g24580DBnaC04g24580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZN2]
Coordinates
chrLK032265:+:98629..100100
Molecular Weight (calculated)
25764.0 Da
IEP (calculated)
4.745
GRAVY (calculated)
-0.361
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAAVESQF HVLAVDDSSL DRKLIERLLQ KSSCQVTTVD SGYKALEFLG IESNDPNALS TSPQEVEVNL IITDYCMPGM TGYDLLKKVK ESPAFKNIPV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVRM DDLNKLKPHM MKTKLNNQKL EEIEKPLNVA AAAAAVEPEI TDSAEVGSKI LTLQSELEPK QVHLQVAQQE
201: EQPLGNNKRK SMEEGLSTDR SRPRFECITT AV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVRM DDLNKLKPHM MKTKLNNQKL EEIEKPLNVA AAAAAVEPEI TDSAEVGSKI LTLQSELEPK QVHLQVAQQE
201: EQPLGNNKRK SMEEGLSTDR SRPRFECITT AV
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.