Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014649.1-P | Field mustard | nucleus | 98.67 | 94.87 |
| CDY30966 | Canola | cytosol | 96.0 | 93.1 |
| CDY65526 | Canola | cytosol | 59.11 | 84.18 |
| CDY06142 | Canola | cytosol | 82.67 | 78.81 |
| CDX72077 | Canola | cytosol | 80.89 | 77.45 |
| CDX67674 | Canola | cytosol | 80.0 | 76.92 |
| AT3G57040.1 | Thale cress | nucleus | 78.22 | 75.21 |
| CDY35419 | Canola | nucleus | 70.22 | 73.15 |
| CDY22518 | Canola | nucleus | 69.33 | 71.89 |
| CDY06934 | Canola | cytosol | 69.78 | 70.72 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 69.33 | 70.27 |
| CDY23856 | Canola | nucleus | 67.11 | 70.23 |
| CDX79942 | Canola | nucleus | 66.67 | 69.77 |
| PGSC0003DMT400076758 | Potato | nucleus | 61.33 | 61.06 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 59.11 | 61.01 |
| Solyc10g079600.1.1 | Tomato | nucleus | 61.33 | 60.79 |
| PGSC0003DMT400076726 | Potato | nucleus | 60.44 | 60.18 |
| PGSC0003DMT400007618 | Potato | nucleus | 56.0 | 58.88 |
| GSMUA_Achr11P... | Banana | nucleus | 48.0 | 58.38 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 48.44 | 57.67 |
| Solyc10g079700.1.1 | Tomato | nucleus | 60.89 | 57.32 |
| KRH66808 | Soybean | nucleus | 63.11 | 57.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.67 | 57.0 |
| KRG95133 | Soybean | nucleus | 62.22 | 56.91 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 48.44 | 56.48 |
| GSMUA_Achr11P... | Banana | nucleus | 44.89 | 55.8 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 34.67 | 55.32 |
| Os12t0139400-01 | Rice | nucleus | 48.89 | 54.73 |
| Os11t0143300-02 | Rice | cytosol | 48.89 | 52.88 |
| Zm00001d011849_P002 | Maize | cytosol | 53.78 | 51.93 |
| KXG27703 | Sorghum | nucleus | 46.22 | 51.49 |
| Os01t0952500-01 | Rice | cytosol | 52.44 | 50.86 |
| CDY71200 | Canola | cytosol | 28.44 | 50.39 |
| CDY59626 | Canola | cytosol | 28.44 | 50.39 |
| CDX75990 | Canola | cytosol | 28.44 | 50.39 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 51.56 | 50.0 |
| CDX72141 | Canola | cytosol | 28.0 | 49.61 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 50.67 | 49.35 |
| CDY22469 | Canola | cytosol | 34.22 | 48.73 |
| CDY35445 | Canola | cytosol | 34.22 | 47.83 |
| EES02064 | Sorghum | cytosol | 52.0 | 47.76 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 49.78 | 47.06 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 36.89 | 46.37 |
| CDY70164 | Canola | nucleus | 36.89 | 45.36 |
| CDY36905 | Canola | nucleus | 36.89 | 45.36 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 36.89 | 45.36 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 48.89 | 45.08 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 48.0 | 45.0 |
| Zm00001d023242_P001 | Maize | nucleus | 27.56 | 44.6 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 36.44 | 44.57 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 36.0 | 44.26 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 34.67 | 44.07 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 35.56 | 43.48 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 32.44 | 43.2 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 47.56 | 43.15 |
| CDX84366 | Canola | nucleus | 36.0 | 42.63 |
| CDY00336 | Canola | nucleus | 36.0 | 42.63 |
| CDX96681 | Canola | cytosol | 38.67 | 42.03 |
| Zm00001d052476_P001 | Maize | nucleus | 22.67 | 41.8 |
| CDX83788 | Canola | cytosol | 38.67 | 41.04 |
| CDY26701 | Canola | nucleus | 38.22 | 40.38 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 47.11 | 39.41 |
| CDY41014 | Canola | nucleus | 37.33 | 39.25 |
| CDX68161 | Canola | cytosol | 34.22 | 39.09 |
| CDY45155 | Canola | nucleus | 38.67 | 38.16 |
| KXG22820 | Sorghum | endoplasmic reticulum | 46.22 | 37.28 |
| CDY30913 | Canola | nucleus | 38.67 | 36.55 |
| CDY20630 | Canola | nucleus | 39.56 | 36.03 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 28.0 | 35.8 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 34.22 | 35.32 |
| CDX93424 | Canola | nucleus | 39.56 | 35.18 |
| CDY20948 | Canola | nucleus | 39.56 | 35.18 |
| CDY37975 | Canola | nucleus | 39.56 | 35.18 |
| CDY66046 | Canola | nucleus | 39.11 | 34.78 |
| CDY34890 | Canola | nucleus | 40.0 | 34.62 |
| CDY07801 | Canola | nucleus | 40.0 | 33.96 |
Protein Annotations
| EnsemblPlants:CDX76036 | EnsemblPlantsGene:GSBRNA2T00126266001 | Gene3D:3.40.50.2300 | GO:A0A078CFX1 | GO:GO:0000160 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | PFAM:PF00072 | PFscan:PS50110 | ProteinID:CDX76036 | ProteinID:CDX76036.1 |
| SEG:seg | SMART:SM00448 | SUPFAM:SSF52172 | UniParc:UPI0004EE2E4B | MapMan:11.4.2.5 | : |
Description
BnaA04g03000D
Coordinates
chrLK031806:+:338032..339324
Molecular Weight (calculated)
24884.9 Da
IEP (calculated)
4.922
GRAVY (calculated)
-0.352
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAAVESQF HVLAVDDSSF DRKLIEKLLQ KSSCQVTTVD SGYKALEFLG IESNDPNALS TSPQEVEVNL IITDYCMPGM TGYDLLKKVK ESSAFKNIPV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVRM ADLNKLKPHM MKTKLNNQKL EEIEKPLNVA AAAAAAVEPE IKDSAEVGSK VLTLQSELEP KQEQTLGNNN
201: KRKSMEEGLS TDRSRPRFEC ITTAV
101: VIMSSENVPA RISRCLEEGA EEFFLKPVRM ADLNKLKPHM MKTKLNNQKL EEIEKPLNVA AAAAAAVEPE IKDSAEVGSK VLTLQSELEP KQEQTLGNNN
201: KRKSMEEGLS TDRSRPRFEC ITTAV
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.