Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06934 | Canola | cytosol | 96.4 | 96.4 |
| Bra016943.1-P | Field mustard | cytosol | 95.95 | 95.95 |
| CDY35419 | Canola | nucleus | 85.59 | 87.96 |
| CDY22518 | Canola | nucleus | 84.23 | 86.18 |
| CDY23856 | Canola | nucleus | 82.88 | 85.58 |
| CDX79942 | Canola | nucleus | 82.43 | 85.12 |
| AT2G41310.1 | Thale cress | nucleus | 85.59 | 84.44 |
| CDY65526 | Canola | cytosol | 57.21 | 80.38 |
| CDX76036 | Canola | nucleus | 70.27 | 69.33 |
| CDX72077 | Canola | cytosol | 72.52 | 68.51 |
| CDY06142 | Canola | cytosol | 72.07 | 67.8 |
| CDY30966 | Canola | cytosol | 70.72 | 67.67 |
| CDX67674 | Canola | cytosol | 70.72 | 67.09 |
| PGSC0003DMT400076758 | Potato | nucleus | 62.16 | 61.06 |
| Solyc10g079600.1.1 | Tomato | nucleus | 61.26 | 59.91 |
| PGSC0003DMT400076726 | Potato | nucleus | 60.81 | 59.73 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 57.66 | 58.72 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 49.55 | 58.2 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 50.45 | 58.03 |
| PGSC0003DMT400007618 | Potato | nucleus | 55.86 | 57.94 |
| GSMUA_Achr11P... | Banana | nucleus | 47.75 | 57.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.9 | 56.5 |
| GSMUA_Achr11P... | Banana | nucleus | 45.95 | 56.35 |
| Solyc10g079700.1.1 | Tomato | nucleus | 59.91 | 55.65 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 35.14 | 55.32 |
| KRH66808 | Soybean | nucleus | 61.26 | 54.84 |
| KRG95133 | Soybean | nucleus | 60.36 | 54.47 |
| Os12t0139400-01 | Rice | nucleus | 49.1 | 54.23 |
| CDX72141 | Canola | cytosol | 30.18 | 52.76 |
| Os11t0143300-02 | Rice | cytosol | 49.1 | 52.4 |
| KXG27703 | Sorghum | nucleus | 46.85 | 51.49 |
| CDY71200 | Canola | cytosol | 29.28 | 51.18 |
| CDY59626 | Canola | cytosol | 29.28 | 51.18 |
| CDX75990 | Canola | cytosol | 29.28 | 51.18 |
| Os01t0952500-01 | Rice | cytosol | 53.15 | 50.86 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 40.99 | 50.84 |
| Zm00001d011849_P002 | Maize | cytosol | 52.25 | 49.79 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 40.99 | 49.73 |
| CDY36905 | Canola | nucleus | 40.99 | 49.73 |
| CDY70164 | Canola | nucleus | 40.99 | 49.73 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 40.99 | 49.46 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 40.54 | 49.18 |
| EES02064 | Sorghum | cytosol | 54.05 | 48.98 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 50.9 | 48.92 |
| CDY22469 | Canola | cytosol | 34.68 | 48.73 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 50.45 | 48.28 |
| CDY35445 | Canola | cytosol | 34.23 | 47.2 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 50.0 | 46.64 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 36.94 | 46.33 |
| CDY00336 | Canola | nucleus | 39.64 | 46.32 |
| CDX84366 | Canola | nucleus | 39.64 | 46.32 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 50.0 | 46.25 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 34.68 | 45.56 |
| Zm00001d023242_P001 | Maize | nucleus | 28.38 | 45.32 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 37.39 | 45.11 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 50.0 | 44.76 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 49.1 | 44.67 |
| CDX96681 | Canola | cytosol | 41.44 | 44.44 |
| CDX83788 | Canola | cytosol | 41.44 | 43.4 |
| CDX68161 | Canola | cytosol | 37.84 | 42.64 |
| CDY26701 | Canola | nucleus | 40.09 | 41.78 |
| CDY41014 | Canola | nucleus | 39.64 | 41.12 |
| Zm00001d052476_P001 | Maize | nucleus | 22.52 | 40.98 |
| CDY45155 | Canola | nucleus | 41.89 | 40.79 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 48.65 | 40.15 |
| CDY30913 | Canola | nucleus | 41.89 | 39.08 |
| CDY20630 | Canola | nucleus | 42.79 | 38.46 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 36.94 | 37.61 |
| CDY20948 | Canola | nucleus | 42.79 | 37.55 |
| KXG22820 | Sorghum | endoplasmic reticulum | 46.85 | 37.28 |
| CDY37975 | Canola | nucleus | 42.34 | 37.15 |
| CDY34890 | Canola | nucleus | 43.24 | 36.92 |
| CDX93424 | Canola | nucleus | 41.89 | 36.76 |
| CDY66046 | Canola | nucleus | 41.44 | 36.36 |
| CDY07801 | Canola | nucleus | 43.24 | 36.23 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 26.58 | 33.52 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078FNN9 | UniProt:A0A078FNN9 | EnsemblPlants:CDY14761 | ProteinID:CDY14761 |
| ProteinID:CDY14761.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00084617001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EE9B47 | : | : | : | : |
Description
BnaC04g47580DBnaC04g47580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNN9]
Coordinates
chrLK032047:+:205852..207048
Molecular Weight (calculated)
25043.2 Da
IEP (calculated)
5.231
GRAVY (calculated)
-0.465
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMATESQFH VLAVDDSLVD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RESNESNDPN APSSSPVTHQ EIEINLIITD YCMPGMTGYD LLKRVKESAA
101: FRSIPVVIMS SENVPARISR CLEEGAEEFF LKPVKLADVT KLKPHMMKTK LKKESEKPSI EDNAVLKHEI RKDEEPSVIE ILPLHQDVEQ EPMLSNNKRK
201: AMEEVISTDR SRPKYNDITT LV
101: FRSIPVVIMS SENVPARISR CLEEGAEEFF LKPVKLADVT KLKPHMMKTK LKKESEKPSI EDNAVLKHEI RKDEEPSVIE ILPLHQDVEQ EPMLSNNKRK
201: AMEEVISTDR SRPKYNDITT LV
001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
Arabidopsis Description
ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.