Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35419 | Canola | nucleus | 96.31 | 96.76 |
| AT2G41310.1 | Thale cress | nucleus | 88.48 | 85.33 |
| CDX79942 | Canola | nucleus | 84.33 | 85.12 |
| CDY06934 | Canola | cytosol | 86.64 | 84.68 |
| CDY23856 | Canola | nucleus | 83.87 | 84.65 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 86.18 | 84.23 |
| CDY65526 | Canola | cytosol | 55.76 | 76.58 |
| CDX76036 | Canola | nucleus | 71.89 | 69.33 |
| CDY30966 | Canola | cytosol | 72.35 | 67.67 |
| CDX72077 | Canola | cytosol | 70.97 | 65.53 |
| CDX67674 | Canola | cytosol | 68.66 | 63.68 |
| CDY06142 | Canola | cytosol | 69.12 | 63.56 |
| PGSC0003DMT400076758 | Potato | nucleus | 60.83 | 58.41 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 50.69 | 58.2 |
| PGSC0003DMT400076726 | Potato | nucleus | 59.45 | 57.08 |
| PGSC0003DMT400007618 | Potato | nucleus | 56.22 | 57.01 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 57.14 | 56.88 |
| Solyc10g079600.1.1 | Tomato | nucleus | 59.45 | 56.83 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 50.23 | 56.48 |
| GSMUA_Achr11P... | Banana | nucleus | 47.93 | 56.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.61 | 56.0 |
| Os12t0139400-01 | Rice | nucleus | 51.61 | 55.72 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 35.94 | 55.32 |
| GSMUA_Achr11P... | Banana | nucleus | 46.08 | 55.25 |
| Os11t0143300-02 | Rice | cytosol | 51.61 | 53.85 |
| KRH66808 | Soybean | nucleus | 61.29 | 53.63 |
| KRG95133 | Soybean | nucleus | 60.37 | 53.25 |
| Solyc10g079700.1.1 | Tomato | nucleus | 58.53 | 53.14 |
| KXG27703 | Sorghum | nucleus | 48.85 | 52.48 |
| CDY71200 | Canola | cytosol | 29.95 | 51.18 |
| CDY59626 | Canola | cytosol | 29.95 | 51.18 |
| CDX75990 | Canola | cytosol | 29.95 | 51.18 |
| CDX72141 | Canola | cytosol | 29.49 | 50.39 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 41.47 | 50.28 |
| Os01t0952500-01 | Rice | cytosol | 53.46 | 50.0 |
| CDY36905 | Canola | nucleus | 41.94 | 49.73 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 41.94 | 49.73 |
| CDY70164 | Canola | nucleus | 41.94 | 49.73 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 41.94 | 49.46 |
| Zm00001d011849_P002 | Maize | cytosol | 53.0 | 49.36 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 41.47 | 49.18 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 52.07 | 48.92 |
| EES02064 | Sorghum | cytosol | 54.84 | 48.57 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 51.61 | 48.28 |
| CDY22469 | Canola | cytosol | 35.02 | 48.1 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 53.0 | 47.92 |
| Zm00001d023242_P001 | Maize | nucleus | 29.95 | 46.76 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 51.15 | 46.64 |
| CDY35445 | Canola | cytosol | 34.56 | 46.58 |
| CDY00336 | Canola | nucleus | 40.09 | 45.79 |
| CDX84366 | Canola | nucleus | 40.09 | 45.79 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 37.33 | 45.76 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 51.61 | 45.16 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 50.69 | 45.08 |
| CDX96681 | Canola | cytosol | 42.86 | 44.93 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 37.79 | 44.57 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 34.56 | 44.38 |
| CDX83788 | Canola | cytosol | 42.86 | 43.87 |
| CDY26701 | Canola | nucleus | 41.47 | 42.25 |
| CDX68161 | Canola | cytosol | 38.25 | 42.13 |
| CDY41014 | Canola | nucleus | 41.01 | 41.59 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 51.15 | 41.26 |
| Zm00001d052476_P001 | Maize | nucleus | 23.04 | 40.98 |
| CDY45155 | Canola | nucleus | 41.47 | 39.47 |
| CDY30913 | Canola | nucleus | 41.47 | 37.82 |
| KXG22820 | Sorghum | endoplasmic reticulum | 48.39 | 37.63 |
| CDY20630 | Canola | nucleus | 42.4 | 37.25 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 37.33 | 37.16 |
| CDY20948 | Canola | nucleus | 42.4 | 36.36 |
| CDY37975 | Canola | nucleus | 41.94 | 35.97 |
| CDY34890 | Canola | nucleus | 42.86 | 35.77 |
| CDX93424 | Canola | nucleus | 41.47 | 35.57 |
| CDY66046 | Canola | nucleus | 41.01 | 35.18 |
| CDY07801 | Canola | nucleus | 42.86 | 35.09 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 25.81 | 31.82 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078GD25 | UniProt:A0A078GD25 | EnsemblPlants:CDY22518 | ProteinID:CDY22518 |
| ProteinID:CDY22518.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00019096001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EF04FD | SEG:seg | : | : | : |
Description
BnaC03g23280DBnaC03g23280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD25]
Coordinates
chrLK032132:+:361646..362887
Molecular Weight (calculated)
24556.5 Da
IEP (calculated)
4.645
GRAVY (calculated)
-0.444
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVVTESQFH VLAVDDSFFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RESNQSDDPN ATSTSPEVEI NLIITDYCMP GMTGYDLLKR VKESAAFRSI
101: PVVIMSSENI PARISRCLEE GAEEFFLKPV KLADLTKLKL HMMKTKLKKE SEKPAEEVKP EIEEEEESPV IEILTLHQEL ESEQQEPMLI NNKRKAMEEV
201: ISTGRSRPKY NDITTSV
101: PVVIMSSENI PARISRCLEE GAEEFFLKPV KLADLTKLKL HMMKTKLKKE SEKPAEEVKP EIEEEEESPV IEILTLHQEL ESEQQEPMLI NNKRKAMEEV
201: ISTGRSRPKY NDITTSV
001: MVMETESKFH VLAVDDSLFD RKMIERLLQK SSCQVTTVDS GSKALEFLGL RVDDNDPNAL STSPQIHQEV EINLIITDYC MPGMTGYDLL KKVKESAAFR
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
101: SIPVVIMSSE NVPARISRCL EEGAEEFFLK PVKLADLTKL KPHMMKTKLK KESEKPVAIE EIVVSKPEIE EEEEESSVIE ILPLHQEIES EQLEPMLSSN
201: KRKAMEEVVS TDRSRPKYND ITTSV
Arabidopsis Description
ARR8Two-component response regulator ARR8 [Source:UniProtKB/Swiss-Prot;Acc:O80365]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.