Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67674 | Canola | cytosol | 93.67 | 63.25 |
| CDX76036 | Canola | nucleus | 84.18 | 59.11 |
| CDY06934 | Canola | cytosol | 81.01 | 57.66 |
| CDY35419 | Canola | nucleus | 78.48 | 57.41 |
| AT3G57040.1 | Thale cress | nucleus | 84.81 | 57.27 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 80.38 | 57.21 |
| CDY06142 | Canola | cytosol | 84.81 | 56.78 |
| CDY30966 | Canola | cytosol | 82.91 | 56.47 |
| CDX79942 | Canola | nucleus | 76.58 | 56.28 |
| CDY23856 | Canola | nucleus | 75.95 | 55.81 |
| CDY22518 | Canola | nucleus | 76.58 | 55.76 |
| CDX72077 | Canola | cytosol | 82.28 | 55.32 |
| GSMUA_Achr11P... | Banana | nucleus | 63.29 | 55.25 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 48.73 | 54.61 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 64.56 | 53.97 |
| GSMUA_Achr11P... | Banana | nucleus | 62.03 | 52.97 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 64.56 | 52.85 |
| PGSC0003DMT400007618 | Potato | nucleus | 71.52 | 52.8 |
| CDX75990 | Canola | cytosol | 42.41 | 52.76 |
| CDY59626 | Canola | cytosol | 42.41 | 52.76 |
| CDY71200 | Canola | cytosol | 42.41 | 52.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 66.46 | 52.5 |
| PGSC0003DMT400076758 | Potato | nucleus | 74.68 | 52.21 |
| CDX72141 | Canola | cytosol | 41.77 | 51.97 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 71.52 | 51.83 |
| Os12t0139400-01 | Rice | nucleus | 64.56 | 50.75 |
| PGSC0003DMT400076726 | Potato | nucleus | 72.15 | 50.44 |
| Solyc10g079600.1.1 | Tomato | nucleus | 72.15 | 50.22 |
| KXG27703 | Sorghum | nucleus | 63.29 | 49.51 |
| Solyc10g079700.1.1 | Tomato | nucleus | 74.68 | 49.37 |
| CDY22469 | Canola | cytosol | 49.37 | 49.37 |
| Os11t0143300-02 | Rice | cytosol | 64.56 | 49.04 |
| CDY35445 | Canola | cytosol | 49.37 | 48.45 |
| KRH66808 | Soybean | nucleus | 75.95 | 48.39 |
| KRG95133 | Soybean | nucleus | 75.32 | 48.37 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 51.9 | 45.81 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 52.53 | 45.36 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 48.1 | 44.97 |
| CDY70164 | Canola | nucleus | 51.9 | 44.81 |
| CDY36905 | Canola | nucleus | 51.9 | 44.81 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 51.9 | 44.57 |
| Os01t0952500-01 | Rice | cytosol | 65.19 | 44.4 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 65.19 | 44.4 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 51.27 | 44.26 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 64.56 | 44.16 |
| Zm00001d011849_P002 | Maize | cytosol | 64.56 | 43.78 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 48.73 | 43.5 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 50.0 | 42.93 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 64.56 | 42.86 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 63.92 | 42.08 |
| EES02064 | Sorghum | cytosol | 65.19 | 42.04 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 64.56 | 41.8 |
| CDY00336 | Canola | nucleus | 49.37 | 41.05 |
| CDX84366 | Canola | nucleus | 49.37 | 41.05 |
| Zm00001d023242_P001 | Maize | nucleus | 36.08 | 41.01 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 63.92 | 40.73 |
| CDX96681 | Canola | cytosol | 51.27 | 39.13 |
| CDX68161 | Canola | cytosol | 48.1 | 38.58 |
| CDX83788 | Canola | cytosol | 51.27 | 38.21 |
| CDY45155 | Canola | nucleus | 54.43 | 37.72 |
| CDY26701 | Canola | nucleus | 50.63 | 37.56 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 63.92 | 37.55 |
| CDY41014 | Canola | nucleus | 50.63 | 37.38 |
| CDY30913 | Canola | nucleus | 54.43 | 36.13 |
| Zm00001d052476_P001 | Maize | nucleus | 27.85 | 36.07 |
| KXG22820 | Sorghum | endoplasmic reticulum | 63.29 | 35.84 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 48.1 | 34.86 |
| CDY20630 | Canola | nucleus | 53.16 | 34.01 |
| CDY20948 | Canola | nucleus | 53.16 | 33.2 |
| CDY37975 | Canola | nucleus | 53.16 | 33.2 |
| CDX93424 | Canola | nucleus | 52.53 | 32.81 |
| CDY66046 | Canola | nucleus | 52.53 | 32.81 |
| CDY34890 | Canola | nucleus | 53.8 | 32.69 |
| CDY07801 | Canola | nucleus | 53.8 | 32.08 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 32.28 | 28.98 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078JID3 | UniProt:A0A078JID3 | EnsemblPlants:CDY65526 | ProteinID:CDY65526 |
| ProteinID:CDY65526.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00046759001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF26 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EF1B86 | : | : | : | : |
Description
BnaCnng47460DBnaCnng47460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JID3]
Coordinates
chrLK034826:+:3834..5195
Molecular Weight (calculated)
17780.8 Da
IEP (calculated)
7.386
GRAVY (calculated)
-0.183
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMAAKPQFH VLAVDDSLFD RKLIERLLQK ASCQVTTVDS GYKALEFLGL RECVEINEPD AVSTSPVIHQ EVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: RKNIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQSGRD
101: RKNIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQSGRD
001: MAKDGGVSCL RRSEMIGIGI GELESPPLDS DQVHVLAVDD SLVDRIVIER LLRITSCKVT AVDSGWRALE FLGLDDDKAA VEFDRLKVDL IITDYCMPGM
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
101: TGYELLKKIK ESTSFKEVPV VIMSSENVMT RIDRCLEEGA EDFLLKPVKL ADVKRLRSYL TRDVKVAAEG NKRKLTTPPP PPPLSATSSM ESSDSTVESP
201: LSMVDDEDSL TMSPESATSL VDSPMRSPGL A
Arabidopsis Description
ARR3response regulator 3 [Source:TAIR;Acc:AT1G59940]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.