Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g03480.t01 | Wine grape | cytosol | 81.43 | 92.68 |
| VIT_13s0067g03490.t01 | Wine grape | nucleus | 91.43 | 87.67 |
| VIT_13s0067g03460.t01 | Wine grape | nucleus | 86.43 | 74.23 |
| VIT_13s0067g03510.t01 | Wine grape | nucleus | 86.43 | 61.42 |
| PGSC0003DMT400007977 | Potato | nucleus | 70.71 | 60.74 |
| Solyc02g071220.2.1 | Tomato | nucleus | 69.29 | 58.43 |
| KRH30056 | Soybean | nucleus | 77.86 | 58.29 |
| KRH13391 | Soybean | nucleus | 74.29 | 58.1 |
| KRH20737 | Soybean | nucleus | 73.57 | 57.54 |
| VIT_13s0067g03430.t01 | Wine grape | nucleus | 87.14 | 55.45 |
| KRH62857 | Soybean | nucleus | 72.14 | 54.59 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 73.57 | 54.5 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 75.0 | 54.4 |
| GSMUA_Achr11P... | Banana | nucleus | 70.71 | 53.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 75.71 | 53.0 |
| VIT_13s0067g03070.t01 | Wine grape | cytosol | 57.14 | 52.29 |
| Os12t0139400-01 | Rice | nucleus | 75.0 | 52.24 |
| GSMUA_Achr11P... | Banana | nucleus | 67.14 | 51.93 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 52.14 | 51.77 |
| KXG27703 | Sorghum | nucleus | 72.86 | 50.49 |
| Os11t0143300-02 | Rice | cytosol | 75.0 | 50.48 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 75.71 | 48.62 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 73.57 | 44.4 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 72.14 | 43.72 |
| Zm00001d023242_P001 | Maize | nucleus | 42.86 | 43.17 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 72.14 | 42.44 |
| Os01t0952500-01 | Rice | cytosol | 70.0 | 42.24 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 71.43 | 40.98 |
| EES02064 | Sorghum | cytosol | 69.29 | 39.59 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 67.86 | 39.58 |
| Zm00001d011849_P002 | Maize | cytosol | 65.71 | 39.48 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 69.29 | 39.11 |
| VIT_18s0001g02540.t01 | Wine grape | nucleus | 64.29 | 38.79 |
| VIT_01s0026g00940.t01 | Wine grape | nucleus | 60.71 | 38.46 |
| Zm00001d052476_P001 | Maize | nucleus | 32.86 | 37.7 |
| KXG22820 | Sorghum | endoplasmic reticulum | 74.29 | 37.28 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 67.86 | 35.32 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 60.71 | 32.95 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 33.57 | 26.7 |
Protein Annotations
| EntrezGene:100246432 | wikigene:100246432 | EntrezGene:100248094 | wikigene:100248094 | MapMan:11.4.2.5 | Gene3D:3.40.50.2300 |
| ProteinID:CBI40158 | ProteinID:CBI40158.3 | InterPro:CheY-like_superfamily | UniProt:D7UBP3 | EMBL:FN596752 | GO:GO:0000160 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | InterPro:IPR001789 | EntrezGene:LOC100246432 | wikigene:LOC100246432 | EntrezGene:LOC100248094 | wikigene:LOC100248094 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF5 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00015CBD32 | ArrayExpress:VIT_13s0067g03450 | EnsemblPlantsGene:VIT_13s0067g03450 | EnsemblPlants:VIT_13s0067g03450.t01 | RefSeq:XP_002267375 |
| RefSeq:XP_002267375.1 | RefSeq:XP_003634897 | RefSeq:XP_003634897.1 | RefSeq:XP_019073337.1 | : | : |
Description
No Description!
Coordinates
chr13_random:-:1936009..1936844
Molecular Weight (calculated)
15881.3 Da
IEP (calculated)
4.996
GRAVY (calculated)
-0.079
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAAESQFH VLAVDDSLVD RKWIEKLLKT SSFQVTVVDS VSKALEFLGL QEAEQERKVN LIITDYSMPG MTGYDLLRKI KESTSLKDIP VVIMSSENIP
101: SRINRCLEEG AEDFFLKPVQ LSDVNKLRPH LLGWRTLVEI
101: SRINRCLEEG AEDFFLKPVQ LSDVNKLRPH LLGWRTLVEI
001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV
Arabidopsis Description
ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.