Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G41310.1 | Thale cress | nucleus | 89.71 | 54.22 |
| Bra004615.1-P | Field mustard | nucleus | 80.15 | 50.93 |
| CDX79942 | Canola | nucleus | 79.41 | 50.23 |
| CDY23856 | Canola | nucleus | 78.68 | 49.77 |
| AT3G57040.1 | Thale cress | nucleus | 60.29 | 35.04 |
| Zm00001d052476_P001 | Maize | nucleus | 30.15 | 33.61 |
| PGSC0003DMT400076758 | Potato | nucleus | 51.47 | 30.97 |
| Zm00001d023242_P001 | Maize | nucleus | 31.62 | 30.94 |
| PGSC0003DMT400076726 | Potato | nucleus | 50.0 | 30.09 |
| Solyc10g079600.1.1 | Tomato | nucleus | 49.26 | 29.52 |
| VIT_08s0007g05390.t01 | Wine grape | nucleus | 44.12 | 27.52 |
| GSMUA_Achr3P08680_001 | Banana | cytosol | 38.24 | 27.51 |
| KRG95133 | Soybean | nucleus | 49.26 | 27.24 |
| Solyc10g079700.1.1 | Tomato | nucleus | 47.79 | 27.2 |
| KRH66808 | Soybean | nucleus | 49.26 | 27.02 |
| PGSC0003DMT400007618 | Potato | nucleus | 41.18 | 26.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.24 | 26.0 |
| GSMUA_Achr5P08230_001 | Banana | nucleus | 36.03 | 25.39 |
| Os12t0139400-01 | Rice | nucleus | 37.5 | 25.37 |
| Os11t0143300-02 | Rice | cytosol | 37.5 | 24.52 |
| GSMUA_Achr11P... | Banana | nucleus | 33.09 | 24.32 |
| KXG27703 | Sorghum | nucleus | 35.29 | 23.76 |
| GSMUA_Achr11P... | Banana | nucleus | 31.62 | 23.76 |
| TraesCS5D01G140200.1 | Wheat | nucleus | 38.97 | 22.94 |
| Zm00001d011849_P002 | Maize | cytosol | 38.97 | 22.75 |
| EES02064 | Sorghum | cytosol | 40.44 | 22.45 |
| Os01t0952500-01 | Rice | cytosol | 38.24 | 22.41 |
| AT3G48100.1 | Thale cress | cytosol | 30.15 | 22.28 |
| TraesCS5B01G132900.2 | Wheat | cytosol | 37.5 | 21.98 |
| AT5G62920.1 | Thale cress | cytosol | 29.41 | 21.51 |
| TraesCS5A01G131600.2 | Wheat | nucleus | 37.5 | 21.43 |
| TraesCS3B01G548600.1 | Wheat | cytosol | 37.5 | 21.25 |
| AT1G19050.1 | Thale cress | cytosol | 31.62 | 20.87 |
| HORVU5Hr1G043090.1 | Barley | nucleus | 36.76 | 20.49 |
| AT2G40670.2 | Thale cress | cytosol | 24.26 | 20.0 |
| HORVU3Hr1G108540.2 | Barley | nucleus | 36.03 | 19.76 |
| AT3G56380.2 | Thale cress | cytosol, nucleus, plastid | 22.06 | 19.48 |
| AT1G74890.1 | Thale cress | nucleus | 29.41 | 19.42 |
| TraesCS3D01G494600.1 | Wheat | nucleus | 36.03 | 18.22 |
| AT1G10470.1 | Thale cress | nucleus | 31.62 | 16.6 |
| KXG22820 | Sorghum | endoplasmic reticulum | 33.09 | 16.13 |
| GSMUA_Achr8P09640_001 | Banana | cytosol | 19.85 | 15.34 |
| TraesCS4B01G178900.1 | Wheat | cytosol | 15.44 | 14.89 |
| AT1G59940.2 | Thale cress | golgi | 27.94 | 11.76 |
Protein Annotations
| MapMan:35.1 | EntrezGene:815313 | ProteinID:AAD15535.1 | ProteinID:AEC06053.1 | ArrayExpress:AT2G07440 | EnsemblPlantsGene:AT2G07440 |
| RefSeq:AT2G07440 | TAIR:AT2G07440 | RefSeq:AT2G07440-TAIR-G | EnsemblPlants:AT2G07440.1 | TAIR:AT2G07440.1 | Unigene:At.63414 |
| GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR001789 | RefSeq:NP_178754.1 | PFscan:PS50110 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF26 | UniProt:Q9ZQJ8 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI00000A8D81 | : | : |
Description
Putative two-component response regulator protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQJ8]
Coordinates
chr2:-:3093821..3094750
Molecular Weight (calculated)
15671.1 Da
IEP (calculated)
6.528
GRAVY (calculated)
-0.465
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MMARDVKWES AAFRSIHVVI MSSENVPTRI SRCLEKGAEE FFLKPVKLVD HTKLKPHMMK TKLKKESEKP VAIEEIVVSK PEIEEESLVI DILPLHQEVE
101: SEQLEPMLSS NKRKAMEEVI STDRPRPKYN DITTSV
101: SEQLEPMLSS NKRKAMEEVI STDRPRPKYN DITTSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.