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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35445 Canola cytosol 89.09 91.3
Bra000199.1-P Field mustard cytosol 89.09 91.3
CDY22469 Canola cytosol 86.06 89.87
AT3G56380.2 Thale cress cytosol, nucleus, plastid 78.18 83.77
KRH53721 Soybean cytosol 57.58 69.85
PGSC0003DMT400042922 Potato cytosol 62.42 69.59
VIT_13s0067g03070.t01 Wine grape cytosol 64.24 69.28
Solyc06g048930.2.1 Tomato cytosol, nucleus, plastid 61.21 68.24
KRH64213 Soybean cytosol 60.0 67.81
PGSC0003DMT400070964 Potato cytosol, nucleus, plastid 58.79 62.18
Solyc06g048600.2.1 Tomato cytosol, nucleus, plastid 58.79 62.18
AT5G62920.1 Thale cress cytosol 48.48 43.01
AT3G48100.1 Thale cress cytosol 47.88 42.93
AT1G74890.1 Thale cress nucleus 52.12 41.75
AT1G19050.1 Thale cress cytosol 50.91 40.78
AT3G57040.1 Thale cress nucleus 49.09 34.62
AT2G41310.1 Thale cress nucleus 46.67 34.22
AT1G10470.1 Thale cress nucleus 53.33 33.98
AT1G59940.2 Thale cress golgi 49.7 25.39
AT2G07440.1 Thale cress cytosol 20.0 24.26
Protein Annotations
MapMan:11.4.2.5Gene3D:3.40.50.2300EntrezGene:818662ProteinID:AEC09863.1Symbol:ARR16ArrayExpress:AT2G40670
EnsemblPlantsGene:AT2G40670RefSeq:AT2G40670TAIR:AT2G40670RefSeq:AT2G40670-TAIR-GEnsemblPlants:AT2G40670.2TAIR:AT2G40670.2
InterPro:CheY-like_superfamilyUniProt:F4II22GO:GO:0000156GO:GO:0000160GO:GO:0003674GO:GO:0004871
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006139GO:GO:0006355
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719
GO:GO:0009736GO:GO:0009987InterPro:IPR001789RefSeq:NP_001189722.1PFAM:PF00072PO:PO:0000013
PO:PO:0000037PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50110PANTHER:PTHR43874PANTHER:PTHR43874:SF2
Symbol:RR16SMART:SM00448SUPFAM:SSF52172InterPro:Sig_transdc_resp-reg_receiverUniParc:UPI0001E92CA5SEG:seg
Description
ARR16Response regulator 16 [Source:UniProtKB/TrEMBL;Acc:F4II22]
Coordinates
chr2:+:16969854..16971234
Molecular Weight (calculated)
18397.6 Da
IEP (calculated)
6.920
GRAVY (calculated)
-0.081
Length
165 amino acids
Sequence
(BLAST)
001: MNSSGGSCSS LMDVVAYDHH LHHGHDEELH VLAVDDNLID RKLVERLLKI SCCKVTTAEN ALRALEYLGL GDQNQHIDAL TCNVMKVSLI ITDYCMPGMT
101: GFELLKKVKQ ESSNLREVPV VIMSSENIPT RINKCLASGA QMFMQKPLKL ADVEKLKCHL MNCRS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.