Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY35445 | Canola | cytosol | 89.09 | 91.3 |
Bra000199.1-P | Field mustard | cytosol | 89.09 | 91.3 |
CDY22469 | Canola | cytosol | 86.06 | 89.87 |
AT3G56380.2 | Thale cress | cytosol, nucleus, plastid | 78.18 | 83.77 |
KRH53721 | Soybean | cytosol | 57.58 | 69.85 |
PGSC0003DMT400042922 | Potato | cytosol | 62.42 | 69.59 |
VIT_13s0067g03070.t01 | Wine grape | cytosol | 64.24 | 69.28 |
Solyc06g048930.2.1 | Tomato | cytosol, nucleus, plastid | 61.21 | 68.24 |
KRH64213 | Soybean | cytosol | 60.0 | 67.81 |
PGSC0003DMT400070964 | Potato | cytosol, nucleus, plastid | 58.79 | 62.18 |
Solyc06g048600.2.1 | Tomato | cytosol, nucleus, plastid | 58.79 | 62.18 |
AT5G62920.1 | Thale cress | cytosol | 48.48 | 43.01 |
AT3G48100.1 | Thale cress | cytosol | 47.88 | 42.93 |
AT1G74890.1 | Thale cress | nucleus | 52.12 | 41.75 |
AT1G19050.1 | Thale cress | cytosol | 50.91 | 40.78 |
AT3G57040.1 | Thale cress | nucleus | 49.09 | 34.62 |
AT2G41310.1 | Thale cress | nucleus | 46.67 | 34.22 |
AT1G10470.1 | Thale cress | nucleus | 53.33 | 33.98 |
AT1G59940.2 | Thale cress | golgi | 49.7 | 25.39 |
AT2G07440.1 | Thale cress | cytosol | 20.0 | 24.26 |
Protein Annotations
MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | EntrezGene:818662 | ProteinID:AEC09863.1 | Symbol:ARR16 | ArrayExpress:AT2G40670 |
EnsemblPlantsGene:AT2G40670 | RefSeq:AT2G40670 | TAIR:AT2G40670 | RefSeq:AT2G40670-TAIR-G | EnsemblPlants:AT2G40670.2 | TAIR:AT2G40670.2 |
InterPro:CheY-like_superfamily | UniProt:F4II22 | GO:GO:0000156 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006355 |
GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
GO:GO:0009736 | GO:GO:0009987 | InterPro:IPR001789 | RefSeq:NP_001189722.1 | PFAM:PF00072 | PO:PO:0000013 |
PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF2 |
Symbol:RR16 | SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0001E92CA5 | SEG:seg |
Description
ARR16Response regulator 16 [Source:UniProtKB/TrEMBL;Acc:F4II22]
Coordinates
chr2:+:16969854..16971234
Molecular Weight (calculated)
18397.6 Da
IEP (calculated)
6.920
GRAVY (calculated)
-0.081
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSGGSCSS LMDVVAYDHH LHHGHDEELH VLAVDDNLID RKLVERLLKI SCCKVTTAEN ALRALEYLGL GDQNQHIDAL TCNVMKVSLI ITDYCMPGMT
101: GFELLKKVKQ ESSNLREVPV VIMSSENIPT RINKCLASGA QMFMQKPLKL ADVEKLKCHL MNCRS
101: GFELLKKVKQ ESSNLREVPV VIMSSENIPT RINKCLASGA QMFMQKPLKL ADVEKLKCHL MNCRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.