Factsheet for Bra007295.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009364.1-P
Bra023876.1-P
Bra025394.1-P
Bra026012.1-P
Bra036215.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57040.1	Bra026012.1-P	AT1G16970.1	18642946
AT3G57040.1	Bra023876.1-P	AT3G21510.1	10930573
AT3G57040.1	Bra023876.1-P	AT3G21510.1	16965536
AT3G57040.1	Bra025394.1-P	AT3G29350.1	10930573
AT3G57040.1	Bra036215.1-P	AT3G29350.1	10930573
AT3G57040.1	Bra025394.1-P	AT3G29350.1	16965536
AT3G57040.1	Bra036215.1-P	AT3G29350.1	16965536
AT3G57040.1	Bra025394.1-P	AT3G29350.1	18642946
AT3G57040.1	Bra036215.1-P	AT3G29350.1	18642946
AT3G57040.1	Bra025394.1-P	AT3G29350.1	21798944
AT3G57040.1	Bra036215.1-P	AT3G29350.1	21798944
AT3G57040.1	Bra009364.1-P	AT5G08720.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06142	Canola	cytosol	97.03	97.03
CDX72077	Canola	cytosol	87.71	88.09
Bra003265.1-P	Field mustard	cytosol	83.47	82.08
Bra014649.1-P	Field mustard	nucleus	80.93	81.62
AT3G57040.1	Thale cress	nucleus	78.81	79.49
Bra016943.1-P	Field mustard	cytosol	66.1	70.27
Bra000224.1-P	Field mustard	nucleus	63.98	69.91
Bra004615.1-P	Field mustard	nucleus	61.44	67.76
PGSC0003DMT400076758	Potato	nucleus	61.86	64.6
PGSC0003DMT400076726	Potato	nucleus	61.02	63.72
Solyc10g079600.1.1	Tomato	nucleus	60.17	62.56
PGSC0003DMT400007618	Potato	nucleus	55.51	61.22
VIT_08s0007g05390.t01	Wine grape	nucleus	56.36	61.01
GSMUA_Achr3P08680_001	Banana	cytosol	48.73	60.85
GSMUA_Achr11P...	Banana	nucleus	47.46	60.54
Solyc10g079700.1.1	Tomato	nucleus	60.59	59.83
KRH66808	Soybean	nucleus	62.29	59.27
KRG95133	Soybean	nucleus	61.44	58.94
GSMUA_Achr11P...	Banana	nucleus	44.92	58.56
GSMUA_AchrUn_...	Banana	nucleus	49.58	58.5
GSMUA_Achr5P08230_001	Banana	nucleus	47.46	58.03
Os12t0139400-01	Rice	nucleus	47.88	56.22
TraesCS4B01G178900.1	Wheat	cytosol	33.47	56.03
Os11t0143300-02	Rice	cytosol	47.88	54.33
KXG27703	Sorghum	nucleus	46.19	53.96
Bra014695.1-P	Field mustard	cytosol	28.39	52.76
Os01t0952500-01	Rice	cytosol	51.69	52.59
Zm00001d011849_P002	Maize	cytosol	50.85	51.5
EES02064	Sorghum	cytosol	51.69	49.8
Bra000199.1-P	Field mustard	cytosol	33.9	49.69
TraesCS5B01G132900.2	Wheat	cytosol	48.73	49.57
TraesCS5D01G140200.1	Wheat	nucleus	48.31	49.35
Bra033773.1-P	Field mustard	nucleus	36.86	48.33
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	36.44	48.04
TraesCS3B01G548600.1	Wheat	cytosol	47.88	47.08
TraesCS5A01G131600.2	Wheat	nucleus	47.46	47.06
Zm00001d023242_P001	Maize	nucleus	27.54	46.76
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	36.44	46.49
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	32.63	45.56
HORVU5Hr1G043090.1	Barley	nucleus	46.61	45.08
HORVU3Hr1G108540.2	Barley	nucleus	46.61	44.35
Bra010132.1-P	Field mustard	nucleus	35.59	44.21
Bra016526.1-P	Field mustard	cytosol	38.56	43.96
Zm00001d052476_P001	Maize	nucleus	22.03	42.62
Bra025708.1-P	Field mustard	nucleus	38.14	42.25
Bra003782.1-P	Field mustard	cytosol	35.17	42.13
TraesCS3D01G494600.1	Wheat	nucleus	47.46	41.64
Bra027829.1-P	Field mustard	nucleus	38.56	40.27
KXG22820	Sorghum	endoplasmic reticulum	46.19	39.07
Bra019524.1-P	Field mustard	cytosol	21.61	38.06
Bra018439.1-P	Field mustard	nucleus	39.83	37.45
Bra019932.1-P	Field mustard	nucleus	39.83	37.15
GSMUA_Achr8P09640_001	Banana	cytosol	27.54	36.93
Bra031714.1-P	Field mustard	nucleus	40.25	36.4
Bra036963.1-P	Field mustard	nucleus	40.25	36.4

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra007295	EnsemblPlants:Bra007295.1	EnsemblPlants:Bra007295.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4CSV3	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF26	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0002542C77
SEG:seg	:	:	:	:	:

Description

AT3G57040 (E=3e-080) ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator

Coordinates

chrA09:+:28444724..28445963

Molecular Weight (calculated)

26458.2 Da

IEP (calculated)

5.081

GRAVY (calculated)

-0.318

Length

236 amino acids

Sequence
(BLAST)

001: MGMAAAEWKF HVLAVDDSLV DRKLIERLLQ KSSCQVTTVD SGYKALEFLG LRQGIESNDT TALSLSPQEV NLIITDYCMP GMTGYDLLKK LKESSALKNI
101: PVVIMSSENV PARISRCLEE GAEEFFLKPV RLADLNKLKP HMMKTKLKNQ KLEEIITPSN DENGTVAAVE PEIKDSVEME IIKMLPIQSE TEPKRVLLQV
201: VQQEEQMLSN NKRKSMEEGL STDRPRPRLE GIATAV

Best Arabidopsis Sequence Match ( AT3G57040.1 )
(BLAST)

001: MGMAAESQFH VLAVDDSLFD RKLIERLLQK SSCQVTTVDS GSKALEFLGL RQSTDSNDPN AFSKAPVNHQ VVEVNLIITD YCMPGMTGYD LLKKVKESSA
101: FRDIPVVIMS SENVPARISR CLEEGAEEFF LKPVRLADLN KLKPHMMKTK LKNQKLEEIE TTSKVENGVP TAVADPEIKD STNIEIEILP LQQDLLLVQQ
201: EEQTLSINNK RKSVEEGIST DRARPRFDGI ATAV

Arabidopsis Description

ARR9Two-component response regulator ARR9 [Source:UniProtKB/Swiss-Prot;Acc:O80366]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.