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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G29350.1 Bra018439.1-P AT1G10470.1 16965536
AT3G29350.1 Bra019932.1-P AT1G10470.1 16965536
AT3G29350.1 Bra031714.1-P AT1G10470.1 16965536
AT3G29350.1 Bra036963.1-P AT1G10470.1 16965536
AT3G29350.1 Bra016526.1-P AT1G19050.1 16965536
AT3G29350.1 Bra025708.1-P AT1G19050.1 16965536
AT3G29350.1 Bra016526.1-P AT1G19050.1 18642946
AT3G29350.1 Bra025708.1-P AT1G19050.1 18642946
AT3G29350.1 Bra016526.1-P AT1G19050.1 21798944
AT3G29350.1 Bra025708.1-P AT1G19050.1 21798944
AT3G29350.1 Bra030037.1-P AT1G27320.1 16965536
AT3G29350.1 Bra004160.1-P AT1G66340.1 10930573
AT3G29350.1 Bra002095.1-P AT2G17820.1 10930573
AT3G29350.1 Bra000224.1-P AT2G41310.1 16965536
AT3G29350.1 Bra016943.1-P AT2G41310.1 16965536
AT3G29350.1 Bra032761.1-P AT2G47430.1 10930573
AT3G29350.1 Bra023796.1-P AT3G22880.1 17937504
AT3G29350.1 Bra018084.1-P AT3G48100.1 16965536
AT3G29350.1 Bra019524.1-P AT3G48100.1 16965536
AT3G29350.1 Bra033773.1-P AT3G48100.1 16965536
AT3G29350.1 Bra018084.1-P AT3G48100.1 18642946
AT3G29350.1 Bra019524.1-P AT3G48100.1 18642946
AT3G29350.1 Bra033773.1-P AT3G48100.1 18642946
AT3G29350.1 Bra003265.1-P AT3G57040.1 10930573
AT3G29350.1 Bra007295.1-P AT3G57040.1 10930573
AT3G29350.1 Bra014649.1-P AT3G57040.1 10930573
AT3G29350.1 Bra003265.1-P AT3G57040.1 16965536
AT3G29350.1 Bra007295.1-P AT3G57040.1 16965536
AT3G29350.1 Bra014649.1-P AT3G57040.1 16965536
AT3G29350.1 Bra003265.1-P AT3G57040.1 18642946
AT3G29350.1 Bra007295.1-P AT3G57040.1 18642946
AT3G29350.1 Bra014649.1-P AT3G57040.1 18642946
AT3G29350.1 Bra013730.1-P AT4G23750.1 21705390
AT3G29350.1 Bra019270.1-P AT4G23750.1 21705390
AT3G29350.1 Bra024159.1-P AT4G29170.1 17937504
AT3G29350.1 Bra002334.1-P AT5G20850.1 17937504
AT3G29350.1 Bra006580.1-P AT5G20850.1 17937504
AT3G29350.1 Bra035381.1-P AT5G35750.1 16965536
AT3G29350.1 Bra035381.1-P AT5G35750.1 18642946
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85268 Canola cytosol 100.0 100.0
CDX86370 Canola cytosol 100.0 100.0
AT3G29350.1 Thale cress cytosol 90.38 90.38
Bra036215.1-P Field mustard cytosol 89.1 89.1
Bra033398.1-P Field mustard cytosol 68.59 68.59
Bra028236.1-P Field mustard cytosol 73.72 64.61
VIT_07s0104g00880.t01 Wine grape cytosol, nucleus, plastid 60.26 62.25
PGSC0003DMT400051833 Potato cytosol 55.13 56.58
KRG95451 Soybean cytosol 45.51 54.2
Solyc06g084410.2.1 Tomato cytosol 41.67 54.17
KRH31957 Soybean cytosol 52.56 53.95
KRH71497 Soybean cytosol, mitochondrion, nucleus 51.92 53.29
GSMUA_Achr11P... Banana cytosol 50.64 52.32
KRH67127 Soybean cytosol 28.85 51.14
Bra027169.1-P Field mustard cytosol, nucleus, plastid 37.82 47.58
Bra023876.1-P Field mustard cytosol, nucleus, plastid 46.79 47.4
GSMUA_Achr7P14570_001 Banana cytosol 43.59 44.74
GSMUA_AchrUn_... Banana cytosol 41.03 42.11
GSMUA_Achr7P14620_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 41.03 42.11
Bra001629.1-P Field mustard cytosol 33.97 38.97
Bra003551.1-P Field mustard cytosol 38.46 38.96
Protein Annotations
Gene3D:1.20.120.160MapMan:11.4.2.2EnsemblPlantsGene:Bra025394EnsemblPlants:Bra025394.1EnsemblPlants:Bra025394.1-PGO:GO:0000160
GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987InterPro:HPT_dom_sfInterPro:IPR008207InterPro:IPR036641
UniProt:M4E9D8PFAM:PF01627PFscan:PS50894PANTHER:PTHR28242PANTHER:PTHR28242:SF13SUPFAM:SSF47226
InterPro:Sig_transdc_His_kin_Hpt_domUniParc:UPI000253FA7B::::
Description
AT3G29350 (E=3e-077) AHP2 | AHP2 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2); histidine phosphotransfer kinase/ protein binding / signal transducer
Coordinates
chrA06:+:21828475..21829492
Molecular Weight (calculated)
17464.9 Da
IEP (calculated)
4.599
GRAVY (calculated)
-0.208
Length
156 amino acids
Sequence
(BLAST)
001: MDALVAQLQM QYRNYTVSLY QQGFLDDQFT ELKKLQDDAS PDFVAEVLSL FFEDCVKLIG NMARALDQTG TVDFSQVGAS VHQLKGSSSS VGAKRVKGLC
101: VTFKEYCEAN NYEGCVRCLQ QVDIEYKALQ TKLQDMFNLE KQIIQAGGKV PQVDIN
Best Arabidopsis Sequence Match ( AT3G29350.1 )
(BLAST)
001: MDALIAQLQR QFRDYTISLY QQGFLDDQFT ELKKLQDDGS PDFVSEVLSL FFEDCVKLIS NMARALDTTG TVDFSQVGAS VHQLKGSSSS VGAKRVKTLC
101: VSFKECCEAK NYEGCVRCLQ QVDIEYKALK TKLQDMFNLE KQIIQAGGIV PQVDIN
Arabidopsis Description
AHP2AHP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VEN2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.