Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g084410.2.1 | Tomato | cytosol | 70.39 | 89.17 |
| VIT_07s0104g00880.t01 | Wine grape | cytosol, nucleus, plastid | 71.05 | 71.52 |
| GSMUA_Achr11P... | Banana | cytosol | 69.08 | 69.54 |
| PGSC0003DMT400081747 | Potato | cytosol, nucleus, plastid | 65.79 | 66.23 |
| PGSC0003DMT400073603 | Potato | cytosol | 61.18 | 62.84 |
| CDX74472 | Canola | cytosol | 60.53 | 59.35 |
| CDY37867 | Canola | cytosol | 60.53 | 59.35 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 59.21 | 59.21 |
| KRG95451 | Soybean | cytosol | 50.66 | 58.78 |
| Bra033398.1-P | Field mustard | cytosol | 59.87 | 58.33 |
| KRH67127 | Soybean | cytosol | 32.89 | 56.82 |
| KRH71497 | Soybean | cytosol, mitochondrion, nucleus | 56.58 | 56.58 |
| KRH31957 | Soybean | cytosol | 56.58 | 56.58 |
| AT3G29350.1 | Thale cress | cytosol | 57.89 | 56.41 |
| CDY19992 | Canola | cytosol | 56.58 | 55.13 |
| CDY00096 | Canola | cytosol | 56.58 | 55.13 |
| CDX86370 | Canola | cytosol | 56.58 | 55.13 |
| CDX85268 | Canola | cytosol | 56.58 | 55.13 |
| Bra036215.1-P | Field mustard | cytosol | 56.58 | 55.13 |
| Bra025394.1-P | Field mustard | cytosol | 56.58 | 55.13 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 54.61 | 54.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.61 | 54.61 |
| CDX89890 | Canola | cytosol | 59.21 | 52.94 |
| AT1G03430.2 | Thale cress | cytosol | 53.29 | 51.59 |
| Bra028236.1-P | Field mustard | cytosol | 58.55 | 50.0 |
| PGSC0003DMT400077451 | Potato | cytosol, nucleus, plastid | 42.11 | 47.06 |
| PGSC0003DMT400047799 | Potato | nucleus | 40.79 | 45.26 |
| CDY71948 | Canola | cytosol | 8.55 | 44.83 |
| AT5G39340.2 | Thale cress | extracellular, plasma membrane | 59.87 | 44.61 |
| PGSC0003DMT400001706 | Potato | cytosol | 42.76 | 41.94 |
| AT4G04402.1 | Thale cress | extracellular | 39.47 | 35.93 |
| PGSC0003DMT400094075 | Potato | nucleus | 31.58 | 23.65 |
Protein Annotations
| Gene3D:1.20.120.160 | EntrezGene:102603297 | MapMan:11.4.2.2 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 | UniProt:M1BSA5 | PFAM:PF01627 |
| EnsemblPlantsGene:PGSC0003DMG401020117 | PGSC:PGSC0003DMG401020117 | EnsemblPlants:PGSC0003DMT400051833 | PFscan:PS50894 | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF24 |
| SUPFAM:SSF47226 | InterPro:Sig_transdc_His_kin_Hpt_dom | UniParc:UPI000295661F | RefSeq:XP_006352793.1 | SEG:seg | : |
Description
Histidine phosphotransfer protein [Source:PGSC_GENE;Acc:PGSC0003DMG401020117]
Coordinates
chr6:+:59207716..59212039
Molecular Weight (calculated)
17543.2 Da
IEP (calculated)
5.713
GRAVY (calculated)
-0.211
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIVAKLQKQ FMDFISALYR ERFLDDQFLQ LQKLQDESNP DFVFEVVSLF FEDSEKLINN LAAALQQQVV DFKQVDSHVH QFKGSSSSIG AQRVKNACMA
101: FKTFCEEKNI EGCVQCLQQV KHEYFLVKNK LETLMRLEKQ ILAAGGRIPD LS
101: FKTFCEEKNI EGCVQCLQQV KHEYFLVKNK LETLMRLEKQ ILAAGGRIPD LS
001: MDLVQKQKSL QDYTKSLFLE GILDSQFLQL QQLQDESNPD FVSQVVTLFF QDSDRILNDL SLSLDQQVVD FKKVDPHVHQ LKGSSSSIGA QRVKNACVVF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
101: RSFCEQQNVE ACHRCLQQVK QEYYLVKNRL ETLFKLEQQI VASGGMIPAV ELGF
Arabidopsis Description
AHP1AHP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V856]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.