Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37867 | Canola | cytosol | 82.76 | 15.48 |
| CDX74472 | Canola | cytosol | 79.31 | 14.84 |
| CDX89890 | Canola | cytosol | 86.21 | 14.71 |
| CDY00096 | Canola | cytosol | 75.86 | 14.1 |
| CDY19992 | Canola | cytosol | 75.86 | 14.1 |
| CDX85268 | Canola | cytosol | 72.41 | 13.46 |
| CDX86370 | Canola | cytosol | 72.41 | 13.46 |
| AT4G04402.1 | Thale cress | extracellular | 72.41 | 12.57 |
| VIT_07s0104g00880.t01 | Wine grape | cytosol, nucleus, plastid | 58.62 | 11.26 |
| KRH31957 | Soybean | cytosol | 55.17 | 10.53 |
| KRH71497 | Soybean | cytosol, mitochondrion, nucleus | 51.72 | 9.87 |
| KRG95451 | Soybean | cytosol | 41.38 | 9.16 |
| CDY19286 | Canola | cytosol | 48.28 | 9.09 |
| CDY37282 | Canola | cytosol, nucleus, plastid | 48.28 | 9.09 |
| GSMUA_Achr11P... | Banana | cytosol | 44.83 | 8.61 |
| PGSC0003DMT400051833 | Potato | cytosol | 44.83 | 8.55 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 44.83 | 8.55 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.38 | 7.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.38 | 7.89 |
| CDY54309 | Canola | cytosol | 37.93 | 7.14 |
| CDY57687 | Canola | cytosol | 37.93 | 7.14 |
| CDY56195 | Canola | cytosol, nucleus, plastid | 17.24 | 4.03 |
| CDX75878 | Canola | cytosol | 17.24 | 3.76 |
| CDX82406 | Canola | cytosol | 17.24 | 3.76 |
| CDY30166 | Canola | cytosol | 17.24 | 3.76 |
| KRH67127 | Soybean | cytosol | 0.0 | 0.0 |
| Solyc06g084410.2.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY71948 | EnsemblPlantsGene:GSBRNA2T00022672001 | Gene3D:1.20.120.160 | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0004871 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR036641 | ProteinID:CDY71948 | ProteinID:CDY71948.1 | UniParc:UPI0004EE8D13 |
| UniProt:A0A078JWB7 | MapMan:35.2 | : | : | : | : |
Description
BnaCnng75260DBnaCnng75260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWB7]
Coordinates
chrLK048233:+:232..410
Molecular Weight (calculated)
3225.0 Da
IEP (calculated)
6.493
GRAVY (calculated)
-0.017
Length
29 amino acids
Sequence
(BLAST)
(BLAST)
1: MLKTKLQDLF NLEQQIVQAG GAIPQVNIN
001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN
Arabidopsis Description
AHP5histidine-containing phosphotransfer factor 5 [Source:TAIR;Acc:AT1G03430]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.