Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37867 | Canola | cytosol | 98.06 | 98.06 |
| CDX85268 | Canola | cytosol | 81.94 | 81.41 |
| CDX86370 | Canola | cytosol | 81.94 | 81.41 |
| CDY71948 | Canola | cytosol | 14.84 | 79.31 |
| Bra028236.1-P | Field mustard | cytosol | 89.68 | 78.09 |
| CDY00096 | Canola | cytosol | 78.06 | 77.56 |
| CDY19992 | Canola | cytosol | 78.06 | 77.56 |
| AT5G39340.2 | Thale cress | extracellular, plasma membrane | 92.26 | 70.1 |
| CDX89890 | Canola | cytosol | 73.55 | 67.06 |
| VIT_07s0104g00880.t01 | Wine grape | cytosol, nucleus, plastid | 64.52 | 66.23 |
| PGSC0003DMT400051833 | Potato | cytosol | 59.35 | 60.53 |
| KRH67127 | Soybean | cytosol | 32.26 | 56.82 |
| Solyc06g084410.2.1 | Tomato | cytosol | 43.87 | 56.67 |
| KRG95451 | Soybean | cytosol | 47.74 | 56.49 |
| KRH71497 | Soybean | cytosol, mitochondrion, nucleus | 53.55 | 54.61 |
| KRH31957 | Soybean | cytosol | 53.55 | 54.61 |
| GSMUA_Achr11P... | Banana | cytosol | 52.9 | 54.3 |
| CDY37282 | Canola | cytosol, nucleus, plastid | 52.26 | 52.6 |
| CDY19286 | Canola | cytosol | 52.26 | 52.6 |
| CDY56195 | Canola | cytosol, nucleus, plastid | 36.77 | 45.97 |
| GSMUA_Achr7P14570_001 | Banana | cytosol | 44.52 | 45.39 |
| CDY30166 | Canola | cytosol | 38.71 | 45.11 |
| GSMUA_Achr7P14620_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.87 | 44.74 |
| CDX82406 | Canola | cytosol | 38.06 | 44.36 |
| CDX75878 | Canola | cytosol | 38.06 | 44.36 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.23 | 44.08 |
| CDY57687 | Canola | cytosol | 41.29 | 41.56 |
| CDY54309 | Canola | cytosol | 41.29 | 41.56 |
Protein Annotations
| EnsemblPlants:CDX74472 | EnsemblPlantsGene:GSBRNA2T00114354001 | Gene3D:1.20.120.160 | GO:A0A078CC85 | GO:GO:0000160 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:HPT_dom_sf | InterPro:IPR008207 | InterPro:IPR036641 |
| InterPro:Sig_transdc_His_kin_Hpt_dom | PANTHER:PTHR28242 | PANTHER:PTHR28242:SF13 | PFAM:PF01627 | PFscan:PS50894 | ProteinID:CDX74472 |
| ProteinID:CDX74472.1 | SUPFAM:SSF47226 | UniParc:UPI0004EE8DE8 | MapMan:11.4.2.2 | : | : |
Description
BnaA04g09170D
Coordinates
chrLK031801:-:564649..566159
Molecular Weight (calculated)
17414.7 Da
IEP (calculated)
4.649
GRAVY (calculated)
-0.201
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTLVSQLQR QFRDYTISLY HQGFLDDQFT ELKKLQDECS PDFVAEVVSL FFEDCEKLIG NMARALDQTG NVDFSLVGSS VHQLKGSSSS VGAKRVKGLC
101: VTFKECCDSQ NFEGCVRCLQ QVDIEYKSLK AKLQDLFSLE QQIVQAGGRI PQVDI
101: VTFKECCDSQ NFEGCVRCLQ QVDIEYKSLK AKLQDLFSLE QQIVQAGGRI PQVDI
001: MICKNLFIGI AISNKLYIFF FSLLLPSRRV ERAMDTLIAQ LQRRFCDFTI SLYHQGFLDD QFTELKKLQD ECSPDFVAEV VTLFFEDCEK LISNMARALD
101: QTGNVDFKLV GSSVHQLKGS SSSVGAKRVK GLCVTLKECC DSQNYEGCVR CLQQVDIEYK TLKAKLQDLF NLEQQIVQAG GRIPQVDI
101: QTGNVDFKLV GSSVHQLKGS SSSVGAKRVK GLCVTLKECC DSQNYEGCVR CLQQVDIEYK TLKAKLQDLF NLEQQIVQAG GRIPQVDI
Arabidopsis Description
AHP3histidine-containing phosphotransmitter 3 [Source:TAIR;Acc:AT5G39340]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.