Factsheet for Bra018084.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
nucleus 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002252.1-P
Bra002984.1-P
Bra009364.1-P
Bra009922.1-P
Bra010342.1-P
Bra011079.1-P
Bra011551.1-P
Bra017545.1-P
Bra017566.1-P
Bra017669.1-P
Bra018311.1-P
Bra018315.1-P
Bra019804.1-P
Bra020055.1-P
Bra021636.1-P
Bra021637.1-P
Bra022723.1-P
Bra022798.1-P
Bra022802.1-P
Bra022803.1-P
Bra023876.1-P
Bra024165.1-P
Bra025027.1-P
Bra025394.1-P
Bra026238.1-P
Bra026939.1-P
Bra029260.1-P
Bra030205.1-P
Bra034643.1-P
Bra036215.1-P
Bra036596.1-P
Bra038353.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48100.1	Bra019804.1-P	AT1G13030.1	18642946
AT3G48100.1	Bra026939.1-P	AT1G13030.1	18642946
AT3G48100.1	Bra038353.1-P	AT1G68790.1	18642946
AT3G48100.1	Bra018315.1-P	AT2G30410.1	18642946
AT3G48100.1	Bra022798.1-P	AT2G30410.1	18642946
AT3G48100.1	Bra018311.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra021636.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra021637.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra022802.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra022803.1-P	AT2G30490.1	18642946
AT3G48100.1	Bra023876.1-P	AT3G21510.1	16965536
AT3G48100.1	Bra025394.1-P	AT3G29350.1	16965536
AT3G48100.1	Bra036215.1-P	AT3G29350.1	16965536
AT3G48100.1	Bra025394.1-P	AT3G29350.1	18642946
AT3G48100.1	Bra036215.1-P	AT3G29350.1	18642946
AT3G48100.1	Bra026238.1-P	AT4G17240.1	18642946
AT3G48100.1	Bra030205.1-P	AT4G17240.1	18642946
AT3G48100.1	Bra010342.1-P	AT4G29040.1	18642946
AT3G48100.1	Bra011079.1-P	AT4G29040.1	18642946
AT3G48100.1	Bra024165.1-P	AT4G29040.1	18642946
AT3G48100.1	Bra011551.1-P	AT4G34670.1	18642946
AT3G48100.1	Bra017669.1-P	AT4G34670.1	18642946
AT3G48100.1	Bra034643.1-P	AT4G34670.1	18642946
AT3G48100.1	Bra009364.1-P	AT5G08720.1	18642946
AT3G48100.1	Bra002252.1-P	AT5G19650.1	18642946
AT3G48100.1	Bra020055.1-P	AT5G19650.1	18642946
AT3G48100.1	Bra009922.1-P	AT5G26830.1	18642946
AT3G48100.1	Bra036596.1-P	AT5G26830.1	18642946
AT3G48100.1	Bra017566.1-P	AT5G46250.1	18642946
AT3G48100.1	Bra025027.1-P	AT5G46250.1	18642946
AT3G48100.1	Bra017545.1-P	AT5G46430.1	18642946
AT3G48100.1	Bra002984.1-P	AT5G54490.1	18642946
AT3G48100.1	Bra022723.1-P	AT5G54490.1	18642946
AT3G48100.1	Bra029260.1-P	AT5G62440.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68129	Canola	cytosol, nucleus, plastid	100.0	100.0
CDY36905	Canola	nucleus	100.0	97.81
CDY70164	Canola	nucleus	100.0	97.81
Bra033773.1-P	Field mustard	nucleus	93.3	92.78
AT3G48100.1	Thale cress	cytosol	93.3	90.76
CDY21807	Canola	cytosol, nucleus, peroxisome	92.18	89.67
Bra019524.1-P	Field mustard	cytosol	63.13	84.33
Bra010132.1-P	Field mustard	nucleus	73.74	69.47
Bra015885.1-P	Field mustard	cytosol, golgi, peroxisome	64.25	62.16
Bra003782.1-P	Field mustard	cytosol	64.25	58.38
KRH03376	Soybean	nucleus	65.92	57.0
Solyc03g113720.2.1	Tomato	nucleus	62.01	56.92
KRH57009	Soybean	nucleus	65.92	55.92
PGSC0003DMT400063187	Potato	cytosol	62.01	55.5
Bra016526.1-P	Field mustard	cytosol	63.69	55.07
Bra025708.1-P	Field mustard	nucleus	65.36	54.93
KRH63457	Soybean	cytosol	60.34	52.94
KRH54462	Soybean	cytosol	58.66	51.47
Bra014695.1-P	Field mustard	cytosol	36.31	51.18
Bra000199.1-P	Field mustard	cytosol	44.69	49.69
Bra027829.1-P	Field mustard	nucleus	59.22	46.9
VIT_17s0000g07580.t01	Wine grape	cytosol, nucleus, plastid	65.92	45.74
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	42.46	44.97
Bra018439.1-P	Field mustard	nucleus	59.78	42.63
Bra004615.1-P	Field mustard	nucleus	50.84	42.52
Bra000224.1-P	Field mustard	nucleus	49.72	41.2
Bra019932.1-P	Field mustard	nucleus	57.54	40.71
Bra036963.1-P	Field mustard	nucleus	59.22	40.61
Bra031714.1-P	Field mustard	nucleus	59.22	40.61
Bra016943.1-P	Field mustard	cytosol	50.28	40.54
Bra007295.1-P	Field mustard	cytosol	48.04	36.44
Bra003265.1-P	Field mustard	cytosol	48.6	36.25
Bra014649.1-P	Field mustard	nucleus	46.37	35.47

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra018084	EnsemblPlants:Bra018084.1	EnsemblPlants:Bra018084.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	InterPro:IPR001789	UniProt:M4DNJ7	PFAM:PF00072	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF17	SMART:SM00448	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI000253F327

Description

AT3G48100 (E=6e-089) ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator

Coordinates

chrA06:+:10117962..10119512

Molecular Weight (calculated)

20301.7 Da

IEP (calculated)

6.545

GRAVY (calculated)

-0.182

Length

179 amino acids

Sequence
(BLAST)

001: MRSETLNISN NTSSLASPEL LHVLAVDDSI VDRKFIERLL RVSSCKVTVV DSATRALQYL GLDGDNNSVG FEDLKINLIM TDYSMPGMTG YELLKKIKES
101: SAFREIPVVI MSSENILPRI DRCLEEGAED FLLKPVKLAD VKRLRDSLLK AEERVFKNIM HKRELEANDI FSQLKRAKI

Best Arabidopsis Sequence Match ( AT3G48100.1 )
(BLAST)

001: MAEVLRPEML DISNDTSSLA SPKLLHVLAV DDSMVDRKFI ERLLRVSSCK VTVVDSATRA LQYLGLDGEN NSSVGFEDLK INLIMTDYSM PGMTGYELLK
101: KIKESSAFRE IPVVIMSSEN ILPRIDRCLE EGAEDFLLKP VKLADVKRLR DSLMKAEERA FKNIMHKREL EANDIYSQLK RAKI

Arabidopsis Description

ARR5Response reactor 2 [Source:UniProtKB/TrEMBL;Acc:Q0WW39]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.