Factsheet for Bra018315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra013481.1-P
Bra018084.1-P
Bra019524.1-P
Bra020912.1-P
Bra033773.1-P
Bra038795.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30410.1	Bra018084.1-P	AT3G48100.1	18642946
AT2G30410.1	Bra019524.1-P	AT3G48100.1	18642946
AT2G30410.1	Bra033773.1-P	AT3G48100.1	18642946
AT2G30410.1	Bra013481.1-P	AT4G20890.1	20638386
AT2G30410.1	Bra020912.1-P	AT4G20890.1	20638386
AT2G30410.1	Bra038795.1-P	AT4G20890.1	20638386

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10736	Canola	cytosol	100.0	100.0
CDY02064	Canola	cytosol	99.09	99.09
AT2G30410.1	Thale cress	cytosol, mitochondrion	95.45	92.92
Bra022798.1-P	Field mustard	cytosol	59.09	89.04
Os02t0816500-01	Rice	cytosol	65.45	80.0
PGSC0003DMT400046252	Potato	cytosol	75.45	73.45
VIT_15s0021g01180.t01	Wine grape	cytosol	77.27	72.65
EES06012	Sorghum	cytosol	73.64	72.32
KRH27177	Soybean	cytosol	74.55	71.93
KRH22160	Soybean	cytosol, mitochondrion	73.64	71.68
GSMUA_Achr1P20090_001	Banana	cytosol, mitochondrion	72.73	71.43
TraesCS5A01G030500.1	Wheat	cytosol	71.82	69.3
TraesCS5B01G028900.1	Wheat	cytosol	71.82	69.3
TraesCS5D01G038700.1	Wheat	cytosol	71.82	69.3
Solyc01g068400.2.1	Tomato	cytosol	46.36	67.11
TraesCS6A01G389600.1	Wheat	mitochondrion	58.18	62.75
Zm00001d018478_P001	Maize	extracellular	72.73	54.79
HORVU6Hr1G090650.2	Barley	cytosol	30.0	52.38
HORVU5Hr1G007960.1	Barley	cytosol, plastid	70.91	47.27

Protein Annotations

Gene3D:1.20.58.90	MapMan:20.3.3.1.1	EnsemblPlantsGene:Bra018315	EnsemblPlants:Bra018315.1	EnsemblPlants:Bra018315.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005856	GO:GO:0005874	GO:GO:0007021	GO:GO:0007023	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	GO:GO:0048487	UniProt:M4DP74	PFAM:PD010430	PFAM:PF02970
PANTHER:PTHR21500	SUPFAM:SSF46988	InterPro:TBCA	InterPro:TBCA_sf	UniParc:UPI0002547B9A	:

Description

AT2G30410 (E=9e-054) KIS, TFCA | KIS (KIESEL); unfolded protein binding

Coordinates

chrA05:-:7393400..7394080

Molecular Weight (calculated)

12366.7 Da

IEP (calculated)

4.878

GRAVY (calculated)

-0.842

Length

110 amino acids

Sequence
(BLAST)

001: MEAIRNLKIK TSTCKRIVKE LHSYEKEVER EAAKTADMKD KGADPYDLKQ QENVLGESRM MIPDCHKRLE SALADLKSTL AGLEETTGPE VEDAKKTVAD
101: VEKQFPTEDA

Best Arabidopsis Sequence Match ( AT2G30410.1 )
(BLAST)

001: MATIRNLKIK TSTCKRIVKE LHSYEKEVER EAAKTADMKD KGADPYDLKQ QENVLGESRM MIPDCHKRLE SALADLKSTL AELEETDEKE GPEIEDAKKT
101: VADVEKQFPT EDA

Arabidopsis Description

TFCATubulin-folding cofactor A [Source:UniProtKB/Swiss-Prot;Acc:O04350]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.