Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- cytosol 2
- mitochondrion 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10736 | Canola | cytosol | 92.92 | 95.45 |
| Bra018315.1-P | Field mustard | cytosol | 92.92 | 95.45 |
| CDY02064 | Canola | cytosol | 92.04 | 94.55 |
| Bra022798.1-P | Field mustard | cytosol | 58.41 | 90.41 |
| Os02t0816500-01 | Rice | cytosol | 65.49 | 82.22 |
| PGSC0003DMT400046252 | Potato | cytosol | 78.76 | 78.76 |
| KRH22160 | Soybean | cytosol, mitochondrion | 77.88 | 77.88 |
| VIT_15s0021g01180.t01 | Wine grape | cytosol | 80.53 | 77.78 |
| KRH27177 | Soybean | cytosol | 77.88 | 77.19 |
| EES06012 | Sorghum | cytosol | 75.22 | 75.89 |
| GSMUA_Achr1P20090_001 | Banana | cytosol, mitochondrion | 74.34 | 75.0 |
| TraesCS5A01G030500.1 | Wheat | cytosol | 73.45 | 72.81 |
| TraesCS5B01G028900.1 | Wheat | cytosol | 73.45 | 72.81 |
| TraesCS5D01G038700.1 | Wheat | cytosol | 73.45 | 72.81 |
| Solyc01g068400.2.1 | Tomato | cytosol | 47.79 | 71.05 |
| TraesCS6A01G389600.1 | Wheat | mitochondrion | 60.18 | 66.67 |
| Zm00001d018478_P001 | Maize | extracellular | 73.45 | 56.85 |
| HORVU6Hr1G090650.2 | Barley | cytosol | 30.97 | 55.56 |
| HORVU5Hr1G007960.1 | Barley | cytosol, plastid | 72.57 | 49.7 |
Protein Annotations
| Gene3D:1.20.58.90 | MapMan:20.3.3.1.1 | PDB:3MXZ | EntrezGene:817592 | ProteinID:AAB63093.2 | ProteinID:AAM14821.1 |
| ProteinID:AEC08383.1 | ProteinID:AEC08384.1 | EMBL:AF486848 | ProteinID:ANM61960.1 | ArrayExpress:AT2G30410 | EnsemblPlantsGene:AT2G30410 |
| RefSeq:AT2G30410 | TAIR:AT2G30410 | RefSeq:AT2G30410-TAIR-G | EnsemblPlants:AT2G30410.1 | TAIR:AT2G30410.1 | EMBL:AY050952 |
| EMBL:AY085814 | EMBL:AY091344 | Unigene:At.23965 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0007021 | GO:GO:0007023 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0048487 |
| Symbol:KIS | RefSeq:NP_001189640.1 | RefSeq:NP_001318319.1 | RefSeq:NP_565699.1 | UniProt:O04350 | PFAM:PD010430 |
| PFAM:PF02970 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR21500 |
| SUPFAM:SSF46988 | InterPro:TBCA | InterPro:TBCA_sf | UniParc:UPI0000001106 | : | : |
Description
TFCATubulin-folding cofactor A [Source:UniProtKB/Swiss-Prot;Acc:O04350]
Coordinates
chr2:+:12958116..12960768
Molecular Weight (calculated)
12825.2 Da
IEP (calculated)
4.681
GRAVY (calculated)
-0.941
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIRNLKIK TSTCKRIVKE LHSYEKEVER EAAKTADMKD KGADPYDLKQ QENVLGESRM MIPDCHKRLE SALADLKSTL AELEETDEKE GPEIEDAKKT
101: VADVEKQFPT EDA
101: VADVEKQFPT EDA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.