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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002413.1-P
Bra003313.1-P
Bra004562.1-P
Bra006627.1-P
Bra017383.1-P
Bra018028.1-P
Bra018084.1-P
Bra018311.1-P endoplasmic reticulum
Bra019524.1-P
Bra020194.1-P
Bra021636.1-P endoplasmic reticulum
Bra021637.1-P endoplasmic reticulum
Bra022660.1-P
Bra022802.1-P endoplasmic reticulum
Bra022803.1-P endoplasmic reticulum
Bra025811.1-P
Bra027678.1-P
Bra027757.1-P
Bra028301.1-P
Bra031157.1-P
Bra033773.1-P
Bra040323.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30490.1 Bra025811.1-P AT1G20330.1 23175744
AT2G30490.1 Bra027678.1-P AT1G64090.2 23175744
AT2G30490.1 Bra027757.1-P AT1G64090.2 23175744
AT2G30490.1 Bra017383.1-P AT2G03510.1 23175744
AT2G30490.1 Bra031157.1-P AT2G20990.3 23175744
AT2G30490.1 Bra018311.1-P AT2G30490.1 23175744
AT2G30490.1 Bra021636.1-P AT2G30490.1 23175744
AT2G30490.1 Bra021637.1-P AT2G30490.1 23175744
AT2G30490.1 Bra022802.1-P AT2G30490.1 23175744
AT2G30490.1 Bra022803.1-P AT2G30490.1 23175744
AT2G30490.1 Bra018311.1-P AT2G30490.1 23175744
AT2G30490.1 Bra021636.1-P AT2G30490.1 23175744
AT2G30490.1 Bra021637.1-P AT2G30490.1 23175744
AT2G30490.1 Bra022802.1-P AT2G30490.1 23175744
AT2G30490.1 Bra022803.1-P AT2G30490.1 23175744
AT2G30490.1 Bra003313.1-P AT2G45140.1 23175744
AT2G30490.1 Bra040323.1-P AT2G45140.1 23175744
AT2G30490.1 Bra004562.1-P AT2G46170.1 23175744
AT2G30490.1 Bra018084.1-P AT3G48100.1 18642946
AT2G30490.1 Bra019524.1-P AT3G48100.1 18642946
AT2G30490.1 Bra033773.1-P AT3G48100.1 18642946
AT2G30490.1 Bra018028.1-P AT3G48890.1 23175744
AT2G30490.1 Bra002413.1-P AT5G22460.1 23175744
AT2G30490.1 Bra006627.1-P AT5G22460.1 23175744
AT2G30490.1 Bra020194.1-P AT5G22460.1 23175744
AT2G30490.1 Bra028301.1-P AT5G52240.1 23175744
AT2G30490.1 Bra022660.1-P AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84829 Canola extracellular, golgi, plasma membrane 99.21 99.21
Bra018311.1-P Field mustard extracellular, golgi, plasma membrane 95.84 95.84
Bra021637.1-P Field mustard extracellular, golgi, plasma membrane 95.25 95.25
AT2G30490.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 95.05 95.05
Bra021636.1-P Field mustard extracellular, golgi, plasma membrane 87.92 87.92
PGSC0003DMT400078288 Potato cytosol 55.25 87.19
PGSC0003DMT400078290 Potato endoplasmic reticulum, golgi 86.14 86.14
Bra022802.1-P Field mustard endoplasmic reticulum, golgi, plasma membrane 85.54 85.88
KRH72830 Soybean endoplasmic reticulum 83.37 83.2
VIT_06s0004g08150.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 82.77 82.77
KRH17200 Soybean endoplasmic reticulum 82.57 82.57
EES03803 Sorghum endoplasmic reticulum, golgi 82.38 82.38
HORVU3Hr1G080830.1 Barley endoplasmic reticulum 80.79 80.79
TraesCS3B01G375100.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 80.2 80.04
Zm00001d012510_P001 Maize endoplasmic reticulum, golgi, plasma membrane 60.79 79.95
TraesCS3A01G342900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 80.0 79.84
TraesCS3D01G336900.2 Wheat endoplasmic reticulum 80.0 79.84
TraesCS2D01G300200.1 Wheat endoplasmic reticulum 72.08 71.94
TraesCS2B01G317700.1 Wheat endoplasmic reticulum, golgi 43.76 68.42
Os01t0820000-00 Rice plasma membrane 27.13 41.14
Protein Annotations
Gene3D:1.10.630.10MapMan:9.2.1.2EnsemblPlantsGene:Bra022803EnsemblPlants:Bra022803.1EnsemblPlants:Bra022803.1-PInterPro:Cyt_P450
InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497
GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705
GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396UniProt:M4E203PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF56SUPFAM:SSF48264
UniParc:UPI000254023FSEG:seg::::
Description
AT2G30490 (E=5e-255) ATC4H, C4H, CYP73A5 | C4H (CINNAMATE-4-HYDROXYLASE); trans-cinnamate 4-monooxygenase
Coordinates
chrA03:-:7141974..7143871
Molecular Weight (calculated)
57698.4 Da
IEP (calculated)
9.453
GRAVY (calculated)
-0.180
Length
505 amino acids
Sequence
(BLAST)
001: MDLLLLEKSL IAVFAAVVLA TVISKLRGKI LKLPPGPIPI PIFGNWLQVG DDLNHRNLVD YAKKFGDLFL LRMGQRNLVV VSSPNLTKEV LHTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTAPFFTN KVVQRNREGW ELEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLR ICQDVKDRRL ALLKKYFVDE RKQIASSKPT GSEGLKCAID HIIEAQQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNEIDTVL GPGVQITEPE LHKLPYLQAV IKETLRLRMA IPLLVPHMNL NDAKLAGYDI PAESKILVNA
401: WWLANSPESW KKPEEFRPER FFEEEAHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRLVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSTIVM
501: KPRSF
Best Arabidopsis Sequence Match ( AT2G30490.1 )
(BLAST)
001: MDLLLLEKSL IAVFVAVILA TVISKLRGKK LKLPPGPIPI PIFGNWLQVG DDLNHRNLVD YAKKFGDLFL LRMGQRNLVV VSSPDLTKEV LLTQGVEFGS
101: RTRNVVFDIF TGKGQDMVFT VYGEHWRKMR RIMTVPFFTN KVVQQNREGW EFEAASVVED VKKNPDSATK GIVLRKRLQL MMYNNMFRIM FDRRFESEDD
201: PLFLRLKALN GERSRLAQSF EYNYGDFIPI LRPFLRGYLK ICQDVKDRRI ALFKKYFVDE RKQIASSKPT GSEGLKCAID HILEAEQKGE INEDNVLYIV
301: ENINVAAIET TLWSIEWGIA ELVNHPEIQS KLRNELDTVL GPGVQVTEPD LHKLPYLQAV VKETLRLRMA IPLLVPHMNL HDAKLAGYDI PAESKILVNA
401: WWLANNPNSW KKPEEFRPER FFEEESHVEA NGNDFRYVPF GVGRRSCPGI ILALPILGIT IGRMVQNFEL LPPPGQSKVD TSEKGGQFSL HILNHSIIVM
501: KPRNC
Arabidopsis Description
CYP73A5Cinnamate-4-hydroxylase [Source:UniProtKB/TrEMBL;Acc:B1GV49]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.