Factsheet for Bra025811.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51340	Canola	extracellular	98.6	98.6
AT1G20330.1	Thale cress	endoplasmic reticulum, golgi	91.85	90.58
Bra015789.1-P	Field mustard	endoplasmic reticulum, extracellular	85.39	84.21
VIT_18s0001g00810.t01	Wine grape	plasma membrane	84.55	83.61
KRH60980	Soybean	endoplasmic reticulum	84.27	83.1
KRH51652	Soybean	endoplasmic reticulum	84.27	82.64
Solyc01g111830.2.1	Tomato	nucleus	79.78	79.33
PGSC0003DMT400047969	Potato	endoplasmic reticulum, plasma membrane	79.49	79.05
PGSC0003DMT400048727	Potato	endoplasmic reticulum, vacuole	78.09	77.87
Solyc10g055680.1.1	Tomato	extracellular	75.56	75.35
PGSC0003DMT400093662	Potato	cytosol	67.42	73.62
Solyc05g008680.1.1	Tomato	extracellular	71.35	69.97
GSMUA_Achr4P25540_001	Banana	cytosol	34.27	69.71
TraesCS4D01G329300.1	Wheat	endoplasmic reticulum, extracellular	69.66	68.13
TraesCS5A01G503700.1	Wheat	endoplasmic reticulum, extracellular	69.66	67.95
TraesCS4B01G332600.1	Wheat	endoplasmic reticulum, extracellular	69.38	67.86
Zm00001d048356_P001	Maize	plasma membrane	70.51	67.84
Os03t0136200-01	Rice	extracellular	69.1	67.77
EER95554	Sorghum	extracellular, golgi	69.66	67.57
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	69.94	67.12
Zm00001d027548_P001	Maize	plasma membrane	69.66	66.85
Zm00001d020855_P001	Maize	cytosol	25.28	66.67
TraesCS1A01G204700.1	Wheat	endoplasmic reticulum, extracellular	67.7	66.39
TraesCS1B01G218300.1	Wheat	endoplasmic reticulum, extracellular	67.7	66.39
TraesCS1D01G208000.1	Wheat	endoplasmic reticulum	67.7	66.39
GSMUA_Achr4P29480_001	Banana	cytosol	33.15	66.29
HORVU1Hr1G052620.1	Barley	endoplasmic reticulum	67.42	66.12
Zm00001d036295_P001	Maize	cytosol	24.72	65.19
Bra006211.1-P	Field mustard	cytosol	38.48	40.06
Bra022503.1-P	Field mustard	cytosol	17.7	23.86
Bra008507.1-P	Field mustard	cytosol	17.42	20.13

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	EnsemblPlantsGene:Bra025811	EnsemblPlants:Bra025811.1	EnsemblPlants:Bra025811.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0006139	GO:GO:0006259	GO:GO:0006629	GO:GO:0006694	GO:GO:0007049
GO:GO:0007275	GO:GO:0007389	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0009058	GO:GO:0009825	GO:GO:0009987	GO:GO:0010051	GO:GO:0016020	GO:GO:0016021
GO:GO:0016049	GO:GO:0016126	GO:GO:0016740	GO:GO:0032259	GO:GO:0032876	GO:GO:0040007
InterPro:IPR030384	UniProt:M4EAK2	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498
PFscan:PS51685	PANTHER:PTHR44742	PANTHER:PTHR44742:SF1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C
TMHMM:TMhelix	UniParc:UPI000253EF58	:	:	:	:

Description

AT1G20330 (E=2e-197) SMT2, CVP1, FRL1 | SMT2 (STEROL METHYLTRANSFERASE 2); S-adenosylmethionine-dependent methyltransferase

Coordinates

chrA06:-:8151956..8153026

Molecular Weight (calculated)

39917.8 Da

IEP (calculated)

7.048

GRAVY (calculated)

-0.217

Length

356 amino acids

Sequence
(BLAST)

001: MDSVALFFTG ALVAGGIYWF LCVLGPAERK GKRALDLSGG SISAEKVQDK YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIR
101: GKSHRDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVK RARDHNRKAG LDALCEVVCG NFLQMPFDDN TFDGAYSIEA
201: TCHAPNLEEV YAEIYRVLKP GSLYVSYEWV TTDKFNAQDE EHVEVIQGIE RGDALPGLRA YSDIAQAAKK VGFQVVKEKD LAAPPAQPWW TRLKMGRLAY
301: WRNHVVVQIL SAVGVAPKGT VDVHEMLFKT ADFLSRGGET EIFSPMHMIL CRKPMS

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.