Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 97.21 | 97.21 |
| Solyc10g055680.1.1 | Tomato | extracellular | 82.4 | 82.63 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 82.68 | 82.22 |
| KRH60980 | Soybean | endoplasmic reticulum | 82.4 | 81.72 |
| AT1G20330.1 | Thale cress | endoplasmic reticulum, golgi | 82.4 | 81.72 |
| KRH51652 | Soybean | endoplasmic reticulum | 82.68 | 81.54 |
| VIT_03s0038g02920.t01 | Wine grape | extracellular | 80.73 | 81.18 |
| CDY71885 | Canola | extracellular | 79.89 | 80.34 |
| Bra025811.1-P | Field mustard | extracellular, golgi | 79.33 | 79.78 |
| Bra015789.1-P | Field mustard | endoplasmic reticulum, extracellular | 80.17 | 79.5 |
| CDY51340 | Canola | extracellular | 79.05 | 79.49 |
| CDX73228 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 79.61 | 79.17 |
| CDX87642 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 79.61 | 78.95 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 77.37 | 77.16 |
| Solyc05g008680.1.1 | Tomato | extracellular | 75.14 | 74.1 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 34.64 | 70.86 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 71.51 | 70.33 |
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 71.51 | 70.33 |
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 71.51 | 70.14 |
| EER95554 | Sorghum | extracellular, golgi | 71.51 | 69.75 |
| Os03t0136200-01 | Rice | extracellular | 70.67 | 69.7 |
| Zm00001d048356_P001 | Maize | plasma membrane | 71.79 | 69.46 |
| Zm00001d027548_P001 | Maize | plasma membrane | 71.79 | 69.27 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 34.36 | 69.1 |
| HORVU4Hr1G080780.1 | Barley | endoplasmic reticulum, extracellular | 70.67 | 68.19 |
| TraesCS1A01G204700.1 | Wheat | endoplasmic reticulum, extracellular | 68.72 | 67.77 |
| TraesCS1B01G218300.1 | Wheat | endoplasmic reticulum, extracellular | 68.72 | 67.77 |
| TraesCS1D01G208000.1 | Wheat | endoplasmic reticulum | 68.44 | 67.49 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 68.44 | 67.49 |
| Zm00001d036295_P001 | Maize | cytosol | 24.86 | 65.93 |
| Zm00001d020855_P001 | Maize | cytosol | 24.3 | 64.44 |
| Solyc01g087560.2.1 | Tomato | cytosol | 38.27 | 39.6 |
| Solyc10g080150.1.1 | Tomato | plastid | 37.71 | 34.18 |
| Solyc08g076360.2.1 | Tomato | plastid | 17.88 | 17.34 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008757 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0032259 | InterPro:IPR030384 |
| UniProt:K4B445 | InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | PFAM:PF08241 | PFAM:PF08498 | PFscan:PS51685 |
| PANTHER:PTHR44742 | PANTHER:PTHR44742:SF1 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:Solyc01g111830.2 | EnsemblPlants:Solyc01g111830.2.1 |
| InterPro:Sterol_MeTrfase_C | TMHMM:TMhelix | UniParc:UPI00027678EE | : | : | : |
Description
Methyltransferase [Source:UniProtKB/TrEMBL;Acc:K4B445]
Coordinates
chr1:-:97994718..97996113
Molecular Weight (calculated)
40087.4 Da
IEP (calculated)
7.085
GRAVY (calculated)
-0.116
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLTLICTV ALVAAGGLYW FVCFFGSAEV KGKRAVQLTG GSIDKENVQD NYKQYWSFFR RPKEIETADK VPVFVDTFYN LVTDIYEWGW GQSFHFSPSL
101: PGKSNREATR IHEEMAVDLL GVKPGARILD AGCGVGGPMR AIAAHSKANV VGITINEYQV KRARMHNKKA GLDSLCEVVC GNFLQMPFAD NSFDGVYSIE
201: ATCHAPKLEE VYQEIYRVLK PGSLYVSYEW VTTELYKAED PEHVEIIHGI ERGDALPGLR TYKDIAEIAK KVGFEVVKEK DLAKPPSHPW WTRLKMGRVA
301: YWRNHILVTI LAFLGIAPKG TVDVHEMLFV TADYLAQGGE KGIFSPMHMI LCRKPAAE
101: PGKSNREATR IHEEMAVDLL GVKPGARILD AGCGVGGPMR AIAAHSKANV VGITINEYQV KRARMHNKKA GLDSLCEVVC GNFLQMPFAD NSFDGVYSIE
201: ATCHAPKLEE VYQEIYRVLK PGSLYVSYEW VTTELYKAED PEHVEIIHGI ERGDALPGLR TYKDIAEIAK KVGFEVVKEK DLAKPPSHPW WTRLKMGRVA
301: YWRNHILVTI LAFLGIAPKG TVDVHEMLFV TADYLAQGGE KGIFSPMHMI LCRKPAAE
001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S
Arabidopsis Description
SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.