Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015789.1-P | Field mustard | endoplasmic reticulum, extracellular | 98.89 | 98.61 |
| CDX87642 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 98.33 | 98.06 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 88.61 | 88.86 |
| CDY71885 | Canola | extracellular | 83.89 | 84.83 |
| CDY51340 | Canola | extracellular | 83.89 | 84.83 |
| KRH60980 | Soybean | endoplasmic reticulum | 82.78 | 82.55 |
| KRH51652 | Soybean | endoplasmic reticulum | 82.78 | 82.09 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 81.67 | 81.67 |
| Solyc01g111830.2.1 | Tomato | nucleus | 79.17 | 79.61 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 78.89 | 79.33 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 77.5 | 78.15 |
| Solyc10g055680.1.1 | Tomato | extracellular | 75.28 | 75.91 |
| PGSC0003DMT400093662 | Potato | cytosol | 66.11 | 73.01 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 35.0 | 72.0 |
| Solyc05g008680.1.1 | Tomato | extracellular | 70.0 | 69.42 |
| TraesCS4B01G332600.1 | Wheat | endoplasmic reticulum, extracellular | 68.06 | 67.31 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 33.06 | 66.85 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 67.5 | 66.76 |
| Os03t0136200-01 | Rice | extracellular | 67.22 | 66.67 |
| TraesCS5A01G503700.1 | Wheat | endoplasmic reticulum, extracellular | 67.5 | 66.58 |
| Zm00001d048356_P001 | Maize | plasma membrane | 67.5 | 65.68 |
| EER95554 | Sorghum | extracellular, golgi | 66.94 | 65.67 |
| HORVU4Hr1G080780.1 | Barley | endoplasmic reticulum, extracellular | 67.5 | 65.5 |
| Zm00001d027548_P001 | Maize | plasma membrane | 67.5 | 65.5 |
| TraesCS1A01G204700.1 | Wheat | endoplasmic reticulum, extracellular | 65.0 | 64.46 |
| TraesCS1B01G218300.1 | Wheat | endoplasmic reticulum, extracellular | 65.0 | 64.46 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 64.44 | 63.91 |
| TraesCS1D01G208000.1 | Wheat | endoplasmic reticulum | 64.44 | 63.91 |
| Zm00001d020855_P001 | Maize | cytosol | 23.89 | 63.7 |
| Zm00001d036295_P001 | Maize | cytosol | 23.06 | 61.48 |
| CDX91102 | Canola | mitochondrion, plastid | 34.44 | 32.55 |
| CDX91533 | Canola | cytosol | 16.11 | 21.97 |
| CDY16380 | Canola | plastid | 16.94 | 17.33 |
| CDY37556 | Canola | plastid | 16.67 | 17.29 |
| CDY56135 | Canola | plastid | 16.11 | 16.71 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | GO:A0A078CE55 | EnsemblPlants:CDX73228 | ProteinID:CDX73228 | ProteinID:CDX73228.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006694 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0009058 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00103729001 | InterPro:IPR030384 | InterPro:MeTrfase_SMT |
| InterPro:Methyltransf_11 | PFAM:PF08241 | PFAM:PF08498 | PFscan:PS51685 | PANTHER:PTHR44742 | PANTHER:PTHR44742:SF1 |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C | TMHMM:TMhelix | UniParc:UPI0004EE724D | SEG:seg |
Description
BnaC06g36760D
Coordinates
chrLK031797:-:2786224..2787306
Molecular Weight (calculated)
40355.2 Da
IEP (calculated)
7.085
GRAVY (calculated)
-0.328
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSVTLYCTA ALLAGGIYWF VCVLGPAERK GKRALDLSGG SISAENVKDN YNQYWSFFRK PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAHVT GITINDYQVK RAKLHNKKAG LDHLCDVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVMKP GSLYVSYEWV TTDKYRDDDE EHREVIQGIE RGDALPGMRR YSDIAAAARK VGFEVVQEKD LAKPPAKPWW NRLKMGRIAY
301: WRNHVVVVVL SAVGIAPKGT VDVHEMLFKT ADYLSRGGET GIFSPMHMIL CRKPEKTSSE
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAHVT GITINDYQVK RAKLHNKKAG LDHLCDVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVMKP GSLYVSYEWV TTDKYRDDDE EHREVIQGIE RGDALPGMRR YSDIAAAARK VGFEVVQEKD LAKPPAKPWW NRLKMGRIAY
301: WRNHVVVVVL SAVGIAPKGT VDVHEMLFKT ADYLSRGGET GIFSPMHMIL CRKPEKTSSE
001: MDSVALYCTA GLIAGAVYWF ICVLGPAERK GKRASDLSGG SISAEKVKDN YNQYWSFFRK PKEIESAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPHVP
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAQVT GITINEYQVQ RAKLHNKKAG LDSLCNVVCG NFLKMPFDEN TFDGAYSIEA
201: TCHAPKLEEV YSEIFRVMKP GSLFVSYEWV TTEKYRDDDE EHKDVIQGIE RGDALPGLRS YADIAVTAKK VGFEVVKEKD LAKPPSKPWW NRLKMGRIAY
301: WRNHVVVVIL SAIGVAPKGT VDVHKMLFKT ADYLTRGGET GIFSPMHMIL CRKPEKASE
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAQVT GITINEYQVQ RAKLHNKKAG LDSLCNVVCG NFLKMPFDEN TFDGAYSIEA
201: TCHAPKLEEV YSEIFRVMKP GSLFVSYEWV TTEKYRDDDE EHKDVIQGIE RGDALPGLRS YADIAVTAKK VGFEVVKEKD LAKPPSKPWW NRLKMGRIAY
301: WRNHVVVVIL SAIGVAPKGT VDVHKMLFKT ADYLTRGGET GIFSPMHMIL CRKPEKASE
Arabidopsis Description
SMT324-methylenesterol C-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94JS4]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.