CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56135	Canola	plastid	98.56	98.56
CDX91533	Canola	cytosol	70.32	92.42
CDY16380	Canola	plastid	92.8	91.48
Bra008507.1-P	Field mustard	cytosol	80.4	90.58
AT1G64970.1	Thale cress	plastid	80.12	79.89
KRH23974	Soybean	cytosol	61.67	72.3
KRH39821	Soybean	cytosol	62.25	71.52
PGSC0003DMT400006168	Potato	cytosol	58.5	65.48
KRH23976	Soybean	plastid	64.27	63.71
VIT_16s0039g01410.t01	Wine grape	plastid	63.11	63.48
GSMUA_Achr1P27850_001	Banana	plastid	60.23	60.23
Os02t0701600-01	Rice	plastid	62.82	60.22
OQU83859	Sorghum	cytosol	51.87	59.41
Zm00001d017746_P001	Maize	plastid	60.23	59.38
KXG30932	Sorghum	plastid	60.52	58.99
TraesCS6D01G245200.1	Wheat	plastid	61.38	58.36
TraesCS6A01G269700.1	Wheat	plastid	61.38	58.2
HORVU6Hr1G068410.1	Barley	plastid	60.81	57.18
Solyc08g076360.2.1	Tomato	plastid	60.52	56.91
TraesCS6B01G297000.1	Wheat	plastid	59.94	54.88
KXG22885	Sorghum	endoplasmic reticulum	52.74	53.98
CDY71885	Canola	extracellular	19.31	18.82
CDY51340	Canola	extracellular	19.02	18.54
CDX87642	Canola	endoplasmic reticulum, extracellular, plasma membrane	17.58	16.9
CDX73228	Canola	endoplasmic reticulum, extracellular, plasma membrane	17.29	16.67
CDX91102	Canola	mitochondrion, plastid	17.58	16.01

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	GO:B2ZC80	UniProt:B2ZC80	unigene:Bna.11055	EnsemblPlants:CDY37556
ProteinID:CDY37556	ProteinID:CDY37556.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0010189	GO:GO:0016740	GO:GO:0032259
GO:GO:0051741	EnsemblPlantsGene:GSBRNA2T00064178001	InterPro:IPR025774	InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241
PFscan:PS51581	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniPathway:UPA00160
UniParc:UPI0001741FFC	SEG:seg	:	:	:	:

Description

BnaA02g20140DBnaA02g20140D protein [Source:UniProtKB/TrEMBL;Acc:B2ZC80]

Coordinates

chrLK032403:-:15992..18523

Molecular Weight (calculated)

38161.9 Da

IEP (calculated)

7.192

GRAVY (calculated)

-0.110

Length

347 amino acids

Sequence
(BLAST)

001: MKATLAPPSS LISLPRHKVS SLRSPSLLLQ SQRPSSALMT TTASRGSVAV TAAATSSAEA LREGIAEFYN ETSGLWEEIW GDHMHHGFYD PDSSVQLSDS
101: GHREAQIRMI EESLRFAGVT EEEKKIKRVV DVGCGIGGSS RYIASKFGAE CIGITLSPVQ AKRANDLAAA QSLSHKVSFQ VADALDQPFE DGIFDLVWSM
201: ESGEHMPDKA KFVKELVRVT APGGRIIIVT WCHRNLSQGE ESLQPWEQNL LDRICKTFYL PAWCSTSDYV ELLQSLSLQD IKCADWSENV APFWPAVIRT
301: ALTWKGLVSL LRSGMKSIKG ALTMPLMIEG YKKGVIKFGI ITCQKPL

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.