Factsheet for TraesCS6B01G297000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G269700.1	Wheat	plastid	78.89	81.69
TraesCS6D01G245200.1	Wheat	plastid	78.1	81.1
HORVU6Hr1G068410.1	Barley	plastid	78.89	81.03
Os02t0701600-01	Rice	plastid	69.66	72.93
KRH23974	Soybean	cytosol	56.2	71.96
KXG30932	Sorghum	plastid	67.55	71.91
Zm00001d017746_P001	Maize	plastid	66.49	71.59
OQU83859	Sorghum	cytosol	56.99	71.29
KRH39821	Soybean	cytosol	56.46	70.86
PGSC0003DMT400006168	Potato	cytosol	56.46	69.03
Bra022503.1-P	Field mustard	cytosol	48.02	68.94
CDX91533	Canola	cytosol	47.49	68.18
GSMUA_Achr1P27850_001	Banana	plastid	60.42	65.99
Bra008507.1-P	Field mustard	cytosol	52.77	64.94
VIT_16s0039g01410.t01	Wine grape	plastid	59.1	64.93
KRH23976	Soybean	plastid	58.31	63.14
KXG22885	Sorghum	endoplasmic reticulum	54.88	61.36
CDY16380	Canola	plastid	55.94	60.23
CDY37556	Canola	plastid	54.88	59.94
Solyc08g076360.2.1	Tomato	plastid	58.05	59.62
CDY56135	Canola	plastid	54.35	59.37
AT1G64970.1	Thale cress	plastid	54.35	59.2
TraesCS4B01G332600.1	Wheat	endoplasmic reticulum, extracellular	17.41	18.13
TraesCS4B01G340700.1	Wheat	golgi	16.36	18.02
TraesCS1B01G218300.1	Wheat	endoplasmic reticulum, extracellular	16.89	17.63

Protein Annotations

EnsemblPlants:TraesCS6B01G297000.1	EnsemblPlantsGene:TraesCS6B01G297000	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:IPR025774	InterPro:MTs_g-TMT
InterPro:Methyltransf_11	InterPro:SAM-dependent_MTases	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25	PFAM:PF08241	PFscan:PS51581
SEG:seg	SUPFAM:SSF53335	TIGR:cd02440	MapMan:10.3.2.6	:	:

Description

No Description!

Coordinates

chr6B:+:533529195..533532299

Molecular Weight (calculated)

40952.8 Da

IEP (calculated)

6.627

GRAVY (calculated)

-0.172

Length

379 amino acids

Sequence
(BLAST)

001: MANSAALLHS LLSTAWTPRR RLDRASATRL APSPGLSCRS SRPTRSVRPM ASSTTAARAD AAPPGLKEGI AGLYDESSGL WESIWGEHMH HGFYDSGEAA
101: SMSDHRRAQI RMIEEALAFA AVPGFTAVFE GMPVLADDPT NKPKTIVDVG YGIGGSSRYL ANKYGAQCSG ITLSPVQAER GNALAAVQGL SDKASFQVAD
201: ALEQPFPDGQ FDLVWSMESG EHMPNKQKFV SELARVAAPG ATIIIVTWCH RNLAPSEDSL KPDELNLLKK ICDAYYLPDW CSPSDYVKIA ESLSLEDIKT
301: ADWSENVAPF WPAVIQSALT WKGLTSLLRS GWKTIKGALV MPLMIQGYKK GLIKFSIITC RKPQAAIEGE PEAASPSVE

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.