Factsheet for Bra008507.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022503.1-P	Field mustard	cytosol	77.6	90.53
CDY56135	Canola	plastid	91.88	81.56
CDY37556	Canola	plastid	90.58	80.4
AT1G64970.1	Thale cress	plastid	86.36	76.44
KRH23974	Soybean	cytosol	68.51	71.28
KRH39821	Soybean	cytosol	68.83	70.2
PGSC0003DMT400006168	Potato	cytosol	65.26	64.84
VIT_16s0039g01410.t01	Wine grape	plastid	68.51	61.16
KRH23976	Soybean	plastid	69.16	60.86
OQU83859	Sorghum	cytosol	57.47	58.42
GSMUA_Achr1P27850_001	Banana	plastid	64.94	57.64
Zm00001d017746_P001	Maize	plastid	65.26	57.1
Os02t0701600-01	Rice	plastid	66.88	56.91
KXG30932	Sorghum	plastid	65.26	56.46
TraesCS6A01G269700.1	Wheat	plastid	65.91	55.46
TraesCS6D01G245200.1	Wheat	plastid	65.58	55.34
HORVU6Hr1G068410.1	Barley	plastid	65.58	54.74
Solyc08g076360.2.1	Tomato	plastid	65.26	54.47
TraesCS6B01G297000.1	Wheat	plastid	64.94	52.77
KXG22885	Sorghum	endoplasmic reticulum	57.47	52.21
Bra025811.1-P	Field mustard	extracellular, golgi	20.13	17.42
Bra006211.1-P	Field mustard	cytosol	18.18	16.37
Bra015789.1-P	Field mustard	endoplasmic reticulum, extracellular	18.83	16.07

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	ProteinID:AEX99754	ProteinID:AEX99754.1	EnsemblPlantsGene:Bra008507	EnsemblPlants:Bra008507.1
EnsemblPlants:Bra008507.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009058	GO:GO:0009987	GO:GO:0010189	GO:GO:0016740	GO:GO:0032259	GO:GO:0051741
InterPro:IPR025774	EMBL:JQ031515	UniProt:M4CWB0	InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241
PFscan:PS51581	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002546E2D
SEG:seg	:	:	:	:	:

Description

AT1G64970 (E=1e-154) G-TMT, TMT1, VTE4 | G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE); tocopherol O-methyltransferase

Coordinates

chrA02:+:16046728..16049487

Molecular Weight (calculated)

33947.6 Da

IEP (calculated)

6.170

GRAVY (calculated)

-0.115

Length

308 amino acids

Sequence
(BLAST)

001: MTTTASRGSV AVTAAAASSA EALREGIAEF YNETSGLWDE IWGDHMHHGF YDPDSSVQLS DSGHREAQIR MIEESLRFAG VTEEKKIKRV VDVGCGIGGS
101: SRYIASKFGA ECIGITLSPV QAKRANDLAT AQSLSHKVSF QVADALDQPF EDGISDLVWS MESGEHMPDK AKFVKELVRV TAPGGRIIIV TWCHRNLSPG
201: EEALQPWEQN LLDRICKTFY LPAWCSTTDY VELLQSLSLQ DIKYADWSEN VAPFWPAVIR TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG
301: IITCQKPL

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.