CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30932	Sorghum	plastid	78.22	66.57
KRH23974	Soybean	cytosol	62.38	63.85
Os02t0701600-01	Rice	plastid	75.58	63.26
KRH39821	Soybean	cytosol	63.04	63.24
Bra022503.1-P	Field mustard	cytosol	54.46	62.5
CDX91533	Canola	cytosol	53.8	61.74
PGSC0003DMT400006168	Potato	cytosol	63.04	61.61
TraesCS6A01G269700.1	Wheat	plastid	74.26	61.48
TraesCS6D01G245200.1	Wheat	plastid	73.93	61.37
HORVU6Hr1G068410.1	Barley	plastid	73.6	60.43
KXG22885	Sorghum	endoplasmic reticulum	66.67	59.59
Bra008507.1-P	Field mustard	cytosol	58.42	57.47
TraesCS6B01G297000.1	Wheat	plastid	71.29	56.99
VIT_16s0039g01410.t01	Wine grape	plastid	64.36	56.52
KRH23976	Soybean	plastid	63.37	54.86
GSMUA_Achr1P27850_001	Banana	plastid	62.71	54.76
CDY37556	Canola	plastid	59.41	51.87
Solyc08g076360.2.1	Tomato	plastid	63.04	51.76
CDY16380	Canola	plastid	60.07	51.7
CDY56135	Canola	plastid	58.42	51.01
AT1G64970.1	Thale cress	plastid	56.77	49.43
EER93245	Sorghum	cytosol	20.46	17.71
KXG22604	Sorghum	cytosol	19.8	17.44
KXG34662	Sorghum	cytosol	19.47	17.15
KXG37308	Sorghum	cytosol	19.47	16.76
EER95554	Sorghum	extracellular, golgi	20.13	16.62
EER90688	Sorghum	cytosol	18.48	16.62

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	EntrezGene:8079111	UniProt:A0A1Z5RJT9	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0010189
GO:GO:0016740	GO:GO:0032259	GO:GO:0051741	InterPro:IPR025774	InterPro:MTs_g-TMT	InterPro:Methyltransf_11
EnsemblPlants:OQU83859	ProteinID:OQU83859	ProteinID:OQU83859.1	PFAM:PF08241	PFscan:PS51581	PANTHER:PTHR43591
PANTHER:PTHR43591:SF25	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3005G190800	SUPFAM:SSF53335	UniParc:UPI0001A86539	RefSeq:XP_002449875.1

Description

hypothetical protein

Coordinates

chr5:+:67471498..67479566

Molecular Weight (calculated)

32849.5 Da

IEP (calculated)

6.357

GRAVY (calculated)

-0.063

Length

303 amino acids

Sequence
(BLAST)

001: MMASAAVPAA TGGLKEDIAG LYDESSGVWE RICGEHLHHG FYEPAGDATA VRPDVRRAQI RTIDEALAFA AVPDDLEKRP KTIVDVGCGI GGSSRYLARK
101: YGAQCTGITL SPVQAERGNA LTAAQGLSDQ VSLQVADALE QPFPDGMFDL VWSMESGEHM PDKRKFVSEL ARVAAPGGTI IIVTCCHRNL NPSETSLKPD
201: EQRLLKRISD AYCLADWFLP SDYVSIAKSL SLEDIRTADW SENVVPFWPA VIKLSLSWKG LTSALTCGWK TINGAMGILL LIQGYRKGLI KFTVITCRKP
301: GPP

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.