CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90688	Sorghum	cytosol	89.77	93.77
EER93245	Sorghum	cytosol	85.8	86.29
Zm00001d013035_P004	Maize	cytosol	85.51	84.79
Os03t0807600-00	Rice	plasma membrane	50.85	68.58
KXG34662	Sorghum	cytosol	63.64	65.12
KXG22604	Sorghum	cytosol	63.35	64.83
HORVU5Hr1G109840.6	Barley	cytosol	53.12	63.18
Os11t0296900-00	Rice	cytosol	33.24	61.58
TraesCS5D01G469400.1	Wheat	nucleus, peroxisome, plastid	60.23	57.14
EER95554	Sorghum	extracellular, golgi	34.94	33.52
OQU83859	Sorghum	cytosol	16.76	19.47
KXG30932	Sorghum	plastid	17.05	16.85
KXG22885	Sorghum	endoplasmic reticulum	15.62	16.22

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	UniProt:A0A1B6QHB0	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016740
GO:GO:0032259	InterPro:IPR030384	EnsemblPlants:KXG37308	ProteinID:KXG37308	ProteinID:KXG37308.1	InterPro:MeTrfase_SMT
InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF2
InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3001G046500	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI00081AB634	:

Description

hypothetical protein

Coordinates

chr1:+:3426129..3431720

Molecular Weight (calculated)

39165.5 Da

IEP (calculated)

5.665

GRAVY (calculated)

-0.252

Length

352 amino acids

Sequence
(BLAST)

001: MSGALDLARS MGGSIDKDQV KSAIDQYLKY HDLHGGEQES RKSNYTDLVN KYYDLATGFY EYGWGDSFHF AGRYPGETFR EAIKRHEHFI ALQLGLKKGM
101: KVLDVGCGIG GPLIEIARFS SAMITGLNYN DYQISRGKEL VFSAGLNEQC SFLKGDFMNM PIADNTFDAA YAIQATCHAP DAQGVYSEIY RVLKPGQYFA
201: LDEWCLTDRF DPNNGKHLAI KAEIELGDGL PDIRTTRQCV QAMKDAGFEV ICAKDLAQDF PCPWYQMMDP NNFSWTSFQC TRPGRIITRA IVNALEFLRI
301: APAGSAGIYS FLTSASDGLL KGGREGIFTA TFFVLARKPL NKETEIVNDG NL

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.