Factsheet for Zm00001d013035_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37308	Sorghum	cytosol	84.79	85.51
EER90688	Sorghum	cytosol	79.44	83.68
Os03t0807600-00	Rice	plasma membrane	49.3	67.05
Os11t0296900-00	Rice	cytosol	33.24	62.11
HORVU5Hr1G109840.6	Barley	cytosol	51.55	61.82
Zm00001d013037_P003	Maize	cytosol	52.68	59.74
Zm00001d044846_P001	Maize	cytosol	23.38	58.45
TraesCS5D01G469400.1	Wheat	nucleus, peroxisome, plastid	59.44	56.87
Zm00001d019139_P013	Maize	cytosol	58.59	49.88
Zm00001d027548_P001	Maize	plasma membrane	34.37	32.88
Zm00001d048356_P001	Maize	plasma membrane	33.52	32.16
Zm00001d020855_P001	Maize	cytosol	10.99	28.89
Zm00001d036295_P001	Maize	cytosol	10.99	28.89
Zm00001d017746_P001	Maize	plastid	16.9	17.05

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	ProteinID:AQK62191.1	ProteinID:AQK62196.1	UniProt:B4FZ18	EMBL:BT042356
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384	InterPro:MeTrfase_SMT
InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF2
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI00017B7658	EnsemblPlantsGene:Zm00001d013035	EnsemblPlants:Zm00001d013035_P004
EnsemblPlants:Zm00001d013035_T004	:	:	:	:	:

Description

Cycloartenol-C-24-methyltransferase

Coordinates

chr5:+:3537741..3542206

Molecular Weight (calculated)

39313.0 Da

IEP (calculated)

7.766

GRAVY (calculated)

-0.189

Length

355 amino acids

Sequence
(BLAST)

001: MAKSGALELA RSTGGSLSKD QVKSAVDQYV KYHDLHGGKQ ESRKSNYTDL ANKYYDLVTG FYEYGWGDSF HLAGGYPGET SREAIKRHQH FLALQLGLKK
101: GMKVLDVGCG IGGPLIEIAR FSSTSITGLN NNDYHISRGK ELIFSAGLSE QCCFLKGDFM DMPISDNTFD AAYAIQATCH APDAQGVYSE VYRVLKPGQY
201: FALDEWCLTD RFDPNNAKHL AIKAEIELGD GLPDIRTTRQ CVQAMKDAGF EVVFAKDLAQ VFPCPWYRVM DPTYFSWAHF QCTRPGRIVT RAIVNTLEFL
301: RIAPAGSMGA YNVLMSASDG LLKGGREGIF TATFFVLGRK PLKEVDIVSL SRKLI

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.