Factsheet for Zm00001d048356_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95554	Sorghum	extracellular, golgi	95.95	96.73
Zm00001d027548_P001	Maize	plasma membrane	96.22	95.96
Os03t0136200-01	Rice	extracellular	91.89	93.66
TraesCS4D01G329300.1	Wheat	endoplasmic reticulum, extracellular	89.19	90.66
TraesCS5A01G503700.1	Wheat	endoplasmic reticulum, extracellular	88.92	90.14
TraesCS4B01G332600.1	Wheat	endoplasmic reticulum, extracellular	88.65	90.11
Zm00001d036295_P001	Maize	cytosol	32.7	89.63
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	88.65	88.41
TraesCS1A01G204700.1	Wheat	endoplasmic reticulum, extracellular	85.95	87.6
TraesCS1B01G218300.1	Wheat	endoplasmic reticulum, extracellular	85.68	87.33
HORVU1Hr1G052620.1	Barley	endoplasmic reticulum	85.41	87.05
TraesCS1D01G208000.1	Wheat	endoplasmic reticulum	85.41	87.05
Zm00001d020855_P001	Maize	cytosol	30.54	83.7
GSMUA_Achr4P29480_001	Banana	cytosol	36.49	75.84
GSMUA_Achr4P25540_001	Banana	cytosol	35.68	75.43
VIT_03s0038g02920.t01	Wine grape	extracellular	71.08	73.88
Solyc01g111830.2.1	Tomato	nucleus	69.46	71.79
CDY71885	Canola	extracellular	68.11	70.79
PGSC0003DMT400047969	Potato	endoplasmic reticulum, plasma membrane	68.38	70.67
KRH60980	Soybean	endoplasmic reticulum	68.92	70.64
AT1G20330.1	Thale cress	endoplasmic reticulum, golgi	68.92	70.64
VIT_18s0001g00810.t01	Wine grape	plasma membrane	68.65	70.56
CDY51340	Canola	extracellular	67.84	70.51
Bra025811.1-P	Field mustard	extracellular, golgi	67.84	70.51
KRH51652	Soybean	endoplasmic reticulum	68.92	70.25
PGSC0003DMT400093662	Potato	cytosol	61.89	70.25
PGSC0003DMT400048727	Potato	endoplasmic reticulum, vacuole	67.03	69.47
Solyc10g055680.1.1	Tomato	extracellular	66.22	68.63
Bra015789.1-P	Field mustard	endoplasmic reticulum, extracellular	65.95	67.59
CDX73228	Canola	endoplasmic reticulum, extracellular, plasma membrane	65.68	67.5
CDX87642	Canola	endoplasmic reticulum, extracellular, plasma membrane	65.14	66.76
AT1G76090.1	Thale cress	endoplasmic reticulum, plasma membrane	64.32	66.3
Solyc05g008680.1.1	Tomato	extracellular	64.59	65.84
Zm00001d013035_P004	Maize	cytosol	32.16	33.52
Zm00001d044846_P001	Maize	cytosol	11.35	29.58
Zm00001d019139_P013	Maize	cytosol	30.27	26.86
Zm00001d013037_P003	Maize	cytosol	22.16	26.2
Zm00001d017746_P001	Maize	plastid	17.3	18.18

Protein Annotations

EntrezGene:100282753	Gene3D:3.40.50.150	MapMan:5.5.1.1	ProteinID:AQL09481.1	EMBL:BT061087	EMBL:BT067135
UniProt:C0HFI1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241
PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44742	PANTHER:PTHR44742:SF2	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
InterPro:Sterol_MeTrfase_C	TMHMM:TMhelix	UniParc:UPI0001948746	EnsemblPlantsGene:Zm00001d048356	EnsemblPlants:Zm00001d048356_P001	EnsemblPlants:Zm00001d048356_T001
SEG:seg	:	:	:	:	:

Description

24-methylenesterol C-methyltransferase 2

Coordinates

chr9:+:154883684..154884796

Molecular Weight (calculated)

41167.3 Da

IEP (calculated)

7.657

GRAVY (calculated)

-0.195

Length

370 amino acids

Sequence
(BLAST)

001: MEAATMVWTA AVVGAGLVYW FVWVMGAAEV KGKRAVDLKM GSITRDKVQD KYTQYWSFFR RPKETATTAA SAEKVPAFVD TFYNLVTDIY EWGWGQSFHF
101: SPSLPGRSHR DATRVHEERV ADLLGARPGH RLLDVGCGVG GPMRAIAAHS GSNVVGITIN EYQVNRARAH NRKAGLDSPR CEVVCGNFLS MPFPDASFDG
201: AYSIEATCHA PRLQDVYGEV YRVLKPGGLY VSYEWVTTPL YRAEDPDHVE CIHGIERGDA LPGLRRQDEI ASIAKEVGFE VLKEQDLALP PALPWWTRLK
301: MGRIAYWRNS LVVRVLTMLR VAPKGVSEVH EMLYETAQHL TRGGETGIFT PMHMVLLRKP AAAASTEEAN

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.