Factsheet for Zm00001d044846_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013037_P003	Maize	cytosol	85.21	38.66
Zm00001d013035_P004	Maize	cytosol	58.45	23.38
Os03t0807600-00	Rice	plasma membrane	39.44	21.46
EER93245	Sorghum	cytosol	52.11	21.14
Os11t0296900-00	Rice	cytosol	24.65	18.42
TraesCS5D01G469400.1	Wheat	nucleus, peroxisome, plastid	42.96	16.44
HORVU5Hr1G109840.6	Barley	cytosol	28.87	13.85
Zm00001d027548_P001	Maize	plasma membrane	30.99	11.86
Zm00001d048356_P001	Maize	plasma membrane	29.58	11.35
Zm00001d019139_P013	Maize	cytosol	26.76	9.11
Zm00001d017746_P001	Maize	plastid	11.27	4.55
Zm00001d020855_P001	Maize	cytosol	2.82	2.96
Zm00001d036295_P001	Maize	cytosol	2.82	2.96

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	UniProt:A0A1D6NRV5	ProteinID:AQL01012.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058
GO:GO:0016740	GO:GO:0032259	PFAM:PF08498	PANTHER:PTHR44068	PANTHER:PTHR44068:SF2	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI000844CF0A	EnsemblPlantsGene:Zm00001d044846	EnsemblPlants:Zm00001d044846_P001	EnsemblPlants:Zm00001d044846_T001

Description

No Description!

Coordinates

chr9:-:5043458..5055287

Molecular Weight (calculated)

15577.5 Da

IEP (calculated)

4.805

GRAVY (calculated)

0.095

Length

142 amino acids

Sequence
(BLAST)

001: MLNNDYHVSR GKVCNLAFFL EYKNCIAYGY ASFNFWLQEH IFSAGLSEQC CSLKGDFMNM PIADNTFDAA YAIQATCYAP EAVNTLEFLR IAPAGSVGAY
101: NVLTSASDGL LKGGREGIFT ASFFVLGRKP LKETEIVNDG NL

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.