Factsheet for Os03t0807600-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
YLoc:	plastid

plasma membrane: 18260611

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0296900-00	Rice	cytosol	46.36	63.68
HORVU5Hr1G109840.6	Barley	cytosol	62.07	54.73
Os07t0206700-01	Rice	cytosol, plasma membrane	69.73	52.91
EER93245	Sorghum	cytosol	68.58	51.14
KXG37308	Sorghum	cytosol	68.58	50.85
Zm00001d013035_P004	Maize	cytosol	67.05	49.3
EER90688	Sorghum	cytosol	62.07	48.07
TraesCS5D01G469400.1	Wheat	nucleus, peroxisome, plastid	67.05	47.17
Zm00001d044846_P001	Maize	cytosol	21.46	39.44
Zm00001d013037_P003	Maize	cytosol	45.98	38.34
Os03t0136200-01	Rice	extracellular	38.7	27.82
Os02t0701600-01	Rice	plastid	20.69	14.92

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	UniProt:A0A0N7KI91	ProteinID:BAS86961.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009058	GO:GO:0016740
GO:GO:0032259	InterPro:IPR030384	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	EnsemblPlantsGene:Os03g0807600	EnsemblPlants:Os03t0807600-00
PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF2	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI000393ADA9	:	:	:

Description

Similar to Cyclopropane-fatty-acyl-phospholipid synthase family protein, expressed. (Os03t0807600-00)

Coordinates

chr3:-:33756172..33758645

Molecular Weight (calculated)

28705.7 Da

IEP (calculated)

7.074

GRAVY (calculated)

-0.045

Length

261 amino acids

Sequence
(BLAST)

001: HEHFLALQLG LKKGMKVLDV GCGIGGPLRE IARFSSASVT GLNNNAYQIS RGKELNFSVG LSETCNFVKA DFMNMPIPDA TFDAAYAIEA TCHAPDAVGV
101: YREICRVLKP GQLFALDEWC MTDKYDPGNS RHRSIKAEIE LGNGLPDIRT TKQCIQALKD AGFEVVSVKD LAEDSPLPWY LPLDSSQFSL NGFRLTRVGR
201: FITHMLVKTL ECLHVAPQGS LRVSSFLETA AEGLVKGAKE GIFTPIFFVL ARKPLDKQPE I

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.