Factsheet for Os07t0206700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34662	Sorghum	cytosol	93.6	93.6
KXG22604	Sorghum	cytosol	93.6	93.6
TraesCS5A01G510200.1	Wheat	cytosol	91.28	91.28
TraesCS4D01G336800.1	Wheat	cytosol	91.28	91.28
TraesCS4B01G340700.1	Wheat	golgi	91.28	91.28
Bra006211.1-P	Field mustard	cytosol	79.36	79.82
Solyc01g087560.2.1	Tomato	cytosol	79.94	79.48
PGSC0003DMT400017668	Potato	cytosol	79.65	79.19
GSMUA_Achr3P29670_001	Banana	cytosol	78.78	78.55
AT5G13710.1	Thale cress	cytosol	76.45	78.27
GSMUA_Achr4P03610_001	Banana	cytosol	77.91	77.68
KRH13976	Soybean	endoplasmic reticulum	76.74	77.65
HORVU4Hr1G084000.2	Barley	plastid	91.86	77.07
KRH32972	Soybean	cytosol	76.16	77.06
VIT_08s0007g08470.t01	Wine grape	cytosol	76.74	76.97
KRH23899	Soybean	cytosol	74.71	75.59
GSMUA_Achr4P13850_001	Banana	cytosol	70.35	71.6
Zm00001d019139_P013	Maize	cytosol	85.17	70.26
KRH23897	Soybean	endoplasmic reticulum	69.19	70.0
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	78.2	69.87
Os03t0807600-00	Rice	plasma membrane	52.91	69.73
CDX91102	Canola	mitochondrion, plastid	74.71	67.45
VIT_13s0064g00440.t01	Wine grape	plastid	80.23	67.15
Os11t0296900-00	Rice	cytosol	31.69	57.37
Os03t0136200-01	Rice	extracellular	37.5	35.54
Os02t0701600-01	Rice	plastid	19.19	18.23

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	EMBL:AF042332	ProteinID:BAC83238.1	ProteinID:BAF21068.1	ProteinID:BAT00552.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0003838	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008202	GO:GO:0008757	GO:GO:0009058	GO:GO:0016126	GO:GO:0016740	GO:GO:0032259
InterPro:IPR030384	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	EnsemblPlantsGene:Os07g0206700	EnsemblPlants:Os07t0206700-01	PFAM:PF08241
PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF3	UniProt:Q6ZIX2	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI00001BF260	SEG:seg	:	:

Description

sterol methyltransferase 1-1Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C- methyltransferase 1) (Sterol C-methyltransferase 1). (Os07t0206700-01);Similar to Cycloartenol-C-24-methyltransferase 1. (Os07t0206700-02)

Coordinates

chr7:-:5750899..5756651

Molecular Weight (calculated)

38613.8 Da

IEP (calculated)

6.321

GRAVY (calculated)

-0.401

Length

344 amino acids

Sequence
(BLAST)

001: MSRSGAMDLA SGLGGKITKD EVKSAVDEYE KYHGYYGGKE EARKSNYTDM VNKYYDLATS FYEYGWGESF HFAHRWNGES LRESIKRHEH FLALQLGVKP
101: GMKVLDVGCG IGGPLREIAK FSLASVTGLN NNEYQITRGK ELNRVAGVSG TCDFVKADFM KMPFSDNTFD AVYAIEATCH APDPVGCYKE IYRVLKPGQC
201: FAVYEWCITD HYEPNNATHK RIKDEIELGN GLPDIRSTQQ CLQAAKDAGF EVIWDKDLAE DSPVPWYLPL DPSRFSLSSF RLTTVGRAIT RTMVKALEYV
301: GLAPQGSERV SNFLEKAAEG LVEGGKKEIF TPMYFFLVRK PISE

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.