Factsheet for Solyc01g087560.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017668	Potato	cytosol	99.13	99.13
Os07t0206700-01	Rice	cytosol, plasma membrane	79.48	79.94
TraesCS5A01G510200.1	Wheat	cytosol	79.19	79.65
TraesCS4D01G336800.1	Wheat	cytosol	79.19	79.65
TraesCS4B01G340700.1	Wheat	golgi	79.19	79.65
KXG34662	Sorghum	cytosol	78.9	79.36
KXG22604	Sorghum	cytosol	78.61	79.07
GSMUA_Achr3P29670_001	Banana	cytosol	75.72	75.94
GSMUA_Achr4P03610_001	Banana	cytosol	75.43	75.65
GSMUA_Achr4P13850_001	Banana	cytosol	68.21	69.82
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	75.43	67.79
HORVU4Hr1G084000.2	Barley	plastid	79.19	66.83
Solyc10g080150.1.1	Tomato	plastid	71.1	62.28
Zm00001d019139_P013	Maize	cytosol	72.54	60.19
Solyc01g111830.2.1	Tomato	nucleus	39.6	38.27
Solyc10g055680.1.1	Tomato	extracellular	39.31	38.1
Solyc05g008680.1.1	Tomato	extracellular	39.6	37.74
Solyc08g076360.2.1	Tomato	plastid	17.63	16.53

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008757	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384
UniProt:K4AYE6	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685
PANTHER:PTHR44068	PANTHER:PTHR44068:SF3	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	EnsemblPlantsGene:Solyc01g087560.2	EnsemblPlants:Solyc01g087560.2.1
InterPro:Sterol_MeTrfase_C	UniParc:UPI000276338B	SEG:seg	:	:	:

Description

Methyltransferase [Source:UniProtKB/TrEMBL;Acc:K4AYE6]

Coordinates

chr1:+:82507228..82513207

Molecular Weight (calculated)

39074.2 Da

IEP (calculated)

6.006

GRAVY (calculated)

-0.438

Length

346 amino acids

Sequence
(BLAST)

001: MSKQGAFDLA FGVGGRIGKD EVLSAVDKYE KYHGYYGGEE DERKNNYTDM VNKYYDLCTS FYEYGWGESF HFAPRWKEES LQESIKRHEH FLALQLGLKP
101: GQKVLDVGCG IGGPLREIAR FSSTSVTGLN NNEYQISRGQ VLNRKVGLDQ TCNFVKGDFM KMPFPDNSFD AVYAIEATCH APDPVGCYRE IYRVLKPGQC
201: FAVYEWCMTD AYNPNNEEQK RIKEEIELGN GLPEIRSTQQ CLEAARKAGF EVVWDKDLAE DSPVSWYMPL DTSHFSLSSF RLTAVGRLFT RNLVSALEYV
301: GVAPKGSQRV QAFLEKAAEG LVGGAKKGIF TPMYFFLVRK PISDSQ

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.