Factsheet for GSMUA_Achr7P27090_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P29670_001	Banana	cytosol	84.16	93.91
GSMUA_Achr4P03610_001	Banana	cytosol	81.56	91.01
GSMUA_Achr4P13850_001	Banana	cytosol	71.43	81.36
KXG34662	Sorghum	cytosol	71.17	79.65
KXG22604	Sorghum	cytosol	71.17	79.65
TraesCS5A01G510200.1	Wheat	cytosol	70.91	79.36
TraesCS4D01G336800.1	Wheat	cytosol	70.91	79.36
TraesCS4B01G340700.1	Wheat	golgi	70.91	79.36
Os07t0206700-01	Rice	cytosol, plasma membrane	69.87	78.2
KRH13976	Soybean	endoplasmic reticulum	68.83	77.94
KRH32972	Soybean	cytosol	68.83	77.94
VIT_08s0007g08470.t01	Wine grape	cytosol	68.83	77.26
Bra006211.1-P	Field mustard	cytosol	68.57	77.19
KRH23899	Soybean	cytosol	67.53	76.47
AT5G13710.1	Thale cress	cytosol	66.49	76.19
PGSC0003DMT400017668	Potato	cytosol	68.31	76.01
Solyc01g087560.2.1	Tomato	cytosol	67.79	75.43
KRH23897	Soybean	endoplasmic reticulum	63.12	71.47
VIT_13s0064g00440.t01	Wine grape	plastid	72.47	67.88
HORVU4Hr1G084000.2	Barley	plastid	71.95	67.56
CDX91102	Canola	mitochondrion, plastid	65.97	66.67
Zm00001d019139_P013	Maize	cytosol	64.68	59.71
GSMUA_Achr4P25540_001	Banana	cytosol	17.92	39.43
GSMUA_Achr4P29480_001	Banana	cytosol	16.88	36.52
GSMUA_Achr1P27850_001	Banana	plastid	15.58	17.29

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:GSMUA_Achr7G27090_001	EnsemblPlants:GSMUA_Achr7P27090_001	EnsemblPlants:GSMUA_Achr7T27090_001	InterPro:IPR030384	UniProt:M0TL45	InterPro:MeTrfase_SMT
InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF3
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI000296B388	:	:

Description

Cycloartenol-C-24-methyltransferase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G27090_001]

Coordinates

chr7:-:28234797..28241947

Molecular Weight (calculated)

43625.1 Da

IEP (calculated)

6.847

GRAVY (calculated)

-0.217

Length

385 amino acids

Sequence
(BLAST)

001: MFCIFLNPKS FVFLNPFWFV FLRKISFCIY RYCVFTVDGQ MSKSGALDLA TGVGGKIKKE DVQSAVDQYE KYHVSYGGDE ETRKANYSDM VNKYYDLATS
101: FYEFGWGESF HFAPRWKGES LRESIKRHEH FLALQLGLKP RMKVLDVGCG IGGPLREIAR FSSASITGLN NNEYQISRGT ELNRIAGLSE SCNFVKADFM
201: KMPFSDDTFD SIYAIEATCH APDAVGCYKE IYRVLKPGQC FAAYEWCMTD HFDPNNESHQ KTKSEIELGN GLPDIRTTRE CLDALKLAGF EVVWEKDLAV
301: DSPVSWYLPL DTSRFSITSF RLTAFGRLIT RTMVKTLEFM GIAPEGSNRV SSFLEKAAEG LVEGGKKEIF TPMYFFVARK PLSGS

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.