Factsheet for VIT_08s0007g08470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22604	Sorghum	cytosol	77.84	77.62
KXG34662	Sorghum	cytosol	77.84	77.62
TraesCS5A01G510200.1	Wheat	cytosol	77.26	77.03
TraesCS4D01G336800.1	Wheat	cytosol	77.26	77.03
TraesCS4B01G340700.1	Wheat	golgi	77.26	77.03
Os07t0206700-01	Rice	cytosol, plasma membrane	76.97	76.74
GSMUA_Achr4P03610_001	Banana	cytosol	76.97	76.52
GSMUA_Achr3P29670_001	Banana	cytosol	76.97	76.52
PGSC0003DMT400017668	Potato	cytosol	74.05	73.41
GSMUA_Achr4P13850_001	Banana	cytosol	69.97	71.01
Solyc10g080150.1.1	Tomato	plastid	79.88	69.37
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	77.26	68.83
VIT_13s0064g00440.t01	Wine grape	plastid	81.63	68.13
HORVU4Hr1G084000.2	Barley	plastid	77.84	65.12
Zm00001d019139_P013	Maize	cytosol	71.14	58.51
VIT_03s0038g02920.t01	Wine grape	extracellular	35.86	34.55
VIT_18s0001g00810.t01	Wine grape	plasma membrane	34.99	33.33
VIT_16s0039g01410.t01	Wine grape	plastid	18.08	17.97

Protein Annotations

EntrezGene:100252116	wikigene:100252116	Gene3D:3.40.50.150	MapMan:5.5.1.1	ProteinID:CBI29845	ProteinID:CBI29845.3
UniProt:D7THW9	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008757	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384
EntrezGene:LOC100252116	wikigene:LOC100252116	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498
PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF3	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C
UniParc:UPI00015CADE6	ArrayExpress:VIT_08s0007g08470	EnsemblPlantsGene:VIT_08s0007g08470	EnsemblPlants:VIT_08s0007g08470.t01	unigene:Vvi.20569	RefSeq:XP_002283950
RefSeq:XP_002283950.1	RefSeq:XP_010653781.1	:	:	:	:

Description

Methyltransferase [Source:UniProtKB/TrEMBL;Acc:D7THW9]

Coordinates

chr8:+:21825558..21829050

Molecular Weight (calculated)

38787.1 Da

IEP (calculated)

5.953

GRAVY (calculated)

-0.340

Length

343 amino acids

Sequence
(BLAST)

001: MSRSGALDLA SGVGGKIEKN EVLSAVQKYE KYHVCHGGDE EERRANYTDM VNKYYDLATS FYEYGWGESF HFASRWKGES LRESIKRHEH FLAVQLGLKC
101: GQKVLDVGCG IGGPLREIAR FSDTSITGLN NNEYQITRGK ELNRLAGVDK TCNFELADFM KMPFSNDTFD AVFAIEATCH APDVLDCYKE IYRVLKPGQC
201: FAAYEWCITD CFDPMNREHQ RIKGEVELGN GLPDIRSVGQ CLEALKLAGF EVLWEKDVAA DSPLPWYLPL DTTQFSLSNF RTTSFGRFIT RNMVKALEFV
301: RLAPEGSQRV QAFLEKAAEA LVEGGREGIF TPMYFFVARK PRS

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.