Factsheet for VIT_18s0001g00810.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G20330.1	Thale cress	endoplasmic reticulum, golgi	86.67	86.43
KRH60980	Soybean	endoplasmic reticulum	86.39	86.15
KRH51652	Soybean	endoplasmic reticulum	86.11	85.4
Bra025811.1-P	Field mustard	extracellular, golgi	83.61	84.55
CDY71885	Canola	extracellular	83.61	84.55
CDY51340	Canola	extracellular	83.06	83.99
Solyc01g111830.2.1	Tomato	nucleus	82.22	82.68
VIT_03s0038g02920.t01	Wine grape	extracellular	81.67	82.58
PGSC0003DMT400047969	Potato	endoplasmic reticulum, plasma membrane	81.94	82.4
CDX73228	Canola	endoplasmic reticulum, extracellular, plasma membrane	81.67	81.67
Bra015789.1-P	Field mustard	endoplasmic reticulum, extracellular	81.39	81.16
CDX87642	Canola	endoplasmic reticulum, extracellular, plasma membrane	80.83	80.61
PGSC0003DMT400048727	Potato	endoplasmic reticulum, vacuole	79.44	80.11
AT1G76090.1	Thale cress	endoplasmic reticulum, plasma membrane	79.44	79.67
Solyc10g055680.1.1	Tomato	extracellular	77.5	78.15
PGSC0003DMT400093662	Potato	cytosol	68.06	75.15
Solyc05g008680.1.1	Tomato	extracellular	72.78	72.18
GSMUA_Achr4P25540_001	Banana	cytosol	34.44	70.86
GSMUA_Achr4P29480_001	Banana	cytosol	34.44	69.66
EER95554	Sorghum	extracellular, golgi	70.83	69.48
Os03t0136200-01	Rice	extracellular	69.72	69.15
Zm00001d048356_P001	Maize	plasma membrane	70.56	68.65
Zm00001d027548_P001	Maize	plasma membrane	70.56	68.46
TraesCS4B01G332600.1	Wheat	endoplasmic reticulum, extracellular	69.17	68.41
TraesCS4D01G329300.1	Wheat	endoplasmic reticulum, extracellular	68.61	67.86
TraesCS5A01G503700.1	Wheat	endoplasmic reticulum, extracellular	68.61	67.67
TraesCS1B01G218300.1	Wheat	endoplasmic reticulum, extracellular	68.06	67.49
TraesCS1A01G204700.1	Wheat	endoplasmic reticulum, extracellular	68.06	67.49
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	69.17	67.12
TraesCS1D01G208000.1	Wheat	endoplasmic reticulum	67.5	66.94
HORVU1Hr1G052620.1	Barley	endoplasmic reticulum	67.5	66.94
Zm00001d020855_P001	Maize	cytosol	25.0	66.67
Zm00001d036295_P001	Maize	cytosol	24.44	65.19
VIT_08s0007g08470.t01	Wine grape	cytosol	33.33	34.99
VIT_13s0064g00440.t01	Wine grape	plastid	38.06	33.33
VIT_16s0039g01410.t01	Wine grape	plastid	16.94	17.68

Protein Annotations

EntrezGene:100254003	wikigene:100254003	Gene3D:3.40.50.150	MapMan:5.5.1.1	EMBL:AM459310	ProteinID:CAN67923
ProteinID:CAN67923.1	ProteinID:CCB45407	ProteinID:CCB45407.1	UniProt:F6H0D5	EMBL:FN595227	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0006694	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009058
GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384	EntrezGene:LOC100254003	wikigene:LOC100254003	InterPro:MeTrfase_SMT
InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44742	PANTHER:PTHR44742:SF1
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	TIGR:TC57084	TMHMM:TMhelix	UniParc:UPI00015C8081
ArrayExpress:VIT_18s0001g00810	EnsemblPlantsGene:VIT_18s0001g00810	EnsemblPlants:VIT_18s0001g00810.t01	unigene:Vvi.5332	RefSeq:XP_002285903	RefSeq:XP_002285903.1

Description

Methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6H0D5]

Coordinates

chr18:+:1565565..1566903

Molecular Weight (calculated)

40309.3 Da

IEP (calculated)

6.137

GRAVY (calculated)

-0.183

Length

360 amino acids

Sequence
(BLAST)

001: MDSLTLFCTA ALLAGGLYWF VCILGSAEQT GKRGVDLSGG SISAEKVQDK YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPAVP
101: GKSHRDATRL HEEMAVDLID VKPGDRILDV GCGVGGPMRA IAAHSRANVV GITINEYQVN RARLHNRKAG LDSLCEVVCG NFLQMPFADN SFDGAYSIEA
201: TCHAPELEEV YAEIFRVLKP GSMYVSYEWV TTDKFKAEDP EHVDVIQGIE RGDALPGLRP YSDIAATARK VGFEVVREKD LAKPPAMPWW TRLKMGRIAY
301: WRNHILIMIF AALGIAPKGT VDVHEMLFKT ADYLTRGGES GIFTPMHMIL CRKPESSEHD

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.