Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G218300.1 | Wheat | endoplasmic reticulum, extracellular | 99.45 | 99.45 |
| HORVU1Hr1G052620.1 | Barley | endoplasmic reticulum | 99.45 | 99.45 |
| TraesCS1A01G204700.1 | Wheat | endoplasmic reticulum, extracellular | 99.17 | 99.17 |
| Os03t0136200-01 | Rice | extracellular | 87.33 | 87.33 |
| TraesCS4D01G329300.1 | Wheat | endoplasmic reticulum, extracellular | 86.78 | 86.54 |
| EER95554 | Sorghum | extracellular, golgi | 87.05 | 86.1 |
| Zm00001d048356_P001 | Maize | plasma membrane | 87.05 | 85.41 |
| Zm00001d027548_P001 | Maize | plasma membrane | 85.95 | 84.1 |
| Zm00001d036295_P001 | Maize | cytosol | 29.2 | 78.52 |
| GSMUA_Achr4P29480_001 | Banana | cytosol | 37.74 | 76.97 |
| GSMUA_Achr4P25540_001 | Banana | cytosol | 36.64 | 76.0 |
| Zm00001d020855_P001 | Maize | cytosol | 27.82 | 74.81 |
| VIT_03s0038g02920.t01 | Wine grape | extracellular | 68.87 | 70.22 |
| KRH60980 | Soybean | endoplasmic reticulum | 68.87 | 69.25 |
| KRH51652 | Soybean | endoplasmic reticulum | 68.87 | 68.87 |
| PGSC0003DMT400047969 | Potato | endoplasmic reticulum, plasma membrane | 67.49 | 68.44 |
| Solyc01g111830.2.1 | Tomato | nucleus | 67.49 | 68.44 |
| PGSC0003DMT400093662 | Potato | cytosol | 60.88 | 67.79 |
| CDY71885 | Canola | extracellular | 66.39 | 67.7 |
| Bra025811.1-P | Field mustard | extracellular, golgi | 66.39 | 67.7 |
| AT1G20330.1 | Thale cress | endoplasmic reticulum, golgi | 67.22 | 67.59 |
| VIT_18s0001g00810.t01 | Wine grape | plasma membrane | 66.94 | 67.5 |
| CDY51340 | Canola | extracellular | 66.12 | 67.42 |
| PGSC0003DMT400048727 | Potato | endoplasmic reticulum, vacuole | 65.01 | 66.11 |
| Solyc10g055680.1.1 | Tomato | extracellular | 65.01 | 66.11 |
| CDX73228 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.91 | 64.44 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 63.64 | 64.35 |
| CDX87642 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.91 | 64.27 |
| Bra015789.1-P | Field mustard | endoplasmic reticulum, extracellular | 63.64 | 63.99 |
| Solyc05g008680.1.1 | Tomato | extracellular | 63.36 | 63.36 |
| TraesCS4D01G336800.1 | Wheat | cytosol | 33.61 | 35.47 |
| TraesCS5D01G469400.1 | Wheat | nucleus, peroxisome, plastid | 32.51 | 31.81 |
| TraesCS6D01G245200.1 | Wheat | plastid | 17.08 | 16.99 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:5.5.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 | GO:GO:0006694 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009058 | GO:GO:0016740 | InterPro:IPR030384 |
| InterPro:MeTrfase_SMT | InterPro:Methyltransf_11 | PFAM:PF08241 | PFAM:PF08498 | PFscan:PS51685 | PANTHER:PTHR44742 |
| PANTHER:PTHR44742:SF2 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | InterPro:Sterol_MeTrfase_C | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1D01G208000 |
| EnsemblPlants:TraesCS1D01G208000.1 | TIGR:cd02440 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:+:294131591..294132682
Molecular Weight (calculated)
40295.2 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.131
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPATMAWTL AAAGFALVYW FVWVMGAAEV QGKRAVDLQM GSIADDKVGD RYSQYWSFFR SPKETAAAAT ADKVPAFVDT FYNLVTDIYE WGWGQSFHFS
101: PSLPGRSHRE ATRVHEERVA DLLEARPGKR LLDVGCGVGG PMRAIAAHSG SDVVGITINE YQVNRARSHN RKAGLDAQCE VVCGNFMAMP FPDASFDGAY
201: SIEATCHAPR LQDVYGEVFR VLKPGGLYVS YEWVTTPLYR ADDPEHVEAI HGIERGDALP GLRRQDEIAV VAKEVGFDVV KELDLALPPA LPWWTRLKMG
301: RLSYWRNSLV IRALTLLRVA PKGVSEVHEM LYETAHHLTR GGETGIFTPM HMVLLRKPAT AAE
101: PSLPGRSHRE ATRVHEERVA DLLEARPGKR LLDVGCGVGG PMRAIAAHSG SDVVGITINE YQVNRARSHN RKAGLDAQCE VVCGNFMAMP FPDASFDGAY
201: SIEATCHAPR LQDVYGEVFR VLKPGGLYVS YEWVTTPLYR ADDPEHVEAI HGIERGDALP GLRRQDEIAV VAKEVGFDVV KELDLALPPA LPWWTRLKMG
301: RLSYWRNSLV IRALTLLRVA PKGVSEVHEM LYETAHHLTR GGETGIFTPM HMVLLRKPAT AAE
001: MDSVALYCTA GLIAGAVYWF ICVLGPAERK GKRASDLSGG SISAEKVKDN YNQYWSFFRK PKEIESAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPHVP
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAQVT GITINEYQVQ RAKLHNKKAG LDSLCNVVCG NFLKMPFDEN TFDGAYSIEA
201: TCHAPKLEEV YSEIFRVMKP GSLFVSYEWV TTEKYRDDDE EHKDVIQGIE RGDALPGLRS YADIAVTAKK VGFEVVKEKD LAKPPSKPWW NRLKMGRIAY
301: WRNHVVVVIL SAIGVAPKGT VDVHKMLFKT ADYLTRGGET GIFSPMHMIL CRKPEKASE
101: GKSDKDATRI HEEMAVDLIK VKPGQKILDA GCGVGGPMRA IAAHSKAQVT GITINEYQVQ RAKLHNKKAG LDSLCNVVCG NFLKMPFDEN TFDGAYSIEA
201: TCHAPKLEEV YSEIFRVMKP GSLFVSYEWV TTEKYRDDDE EHKDVIQGIE RGDALPGLRS YADIAVTAKK VGFEVVKEKD LAKPPSKPWW NRLKMGRIAY
301: WRNHVVVVIL SAIGVAPKGT VDVHKMLFKT ADYLTRGGET GIFSPMHMIL CRKPEKASE
Arabidopsis Description
SMT324-methylenesterol C-methyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q94JS4]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.