Factsheet for VIT_03s0038g02920.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g00810.t01	Wine grape	plasma membrane	82.58	81.67
Solyc01g111830.2.1	Tomato	nucleus	81.18	80.73
PGSC0003DMT400048727	Potato	endoplasmic reticulum, vacuole	80.34	80.11
PGSC0003DMT400047969	Potato	endoplasmic reticulum, plasma membrane	79.49	79.05
Solyc10g055680.1.1	Tomato	extracellular	79.21	78.99
PGSC0003DMT400093662	Potato	cytosol	71.07	77.61
Solyc05g008680.1.1	Tomato	extracellular	75.28	73.83
GSMUA_Achr4P25540_001	Banana	cytosol	35.96	73.14
EER95554	Sorghum	extracellular, golgi	74.44	72.21
Os03t0136200-01	Rice	extracellular	72.75	71.35
Zm00001d048356_P001	Maize	plasma membrane	73.88	71.08
TraesCS4B01G332600.1	Wheat	endoplasmic reticulum, extracellular	72.47	70.88
TraesCS4D01G329300.1	Wheat	endoplasmic reticulum, extracellular	72.47	70.88
GSMUA_Achr4P29480_001	Banana	cytosol	35.39	70.79
TraesCS5A01G503700.1	Wheat	endoplasmic reticulum, extracellular	72.19	70.41
Zm00001d027548_P001	Maize	plasma membrane	73.03	70.08
TraesCS1A01G204700.1	Wheat	endoplasmic reticulum, extracellular	70.51	69.15
TraesCS1B01G218300.1	Wheat	endoplasmic reticulum, extracellular	70.51	69.15
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	71.91	69.0
Zm00001d036295_P001	Maize	cytosol	26.12	68.89
TraesCS1D01G208000.1	Wheat	endoplasmic reticulum	70.22	68.87
HORVU1Hr1G052620.1	Barley	endoplasmic reticulum	70.22	68.87
Zm00001d020855_P001	Maize	cytosol	25.84	68.15
VIT_08s0007g08470.t01	Wine grape	cytosol	34.55	35.86
VIT_13s0064g00440.t01	Wine grape	plastid	39.33	34.06
VIT_16s0039g01410.t01	Wine grape	plastid	18.26	18.84

Protein Annotations

EntrezGene:100262458	wikigene:100262458	Gene3D:3.40.50.150	MapMan:5.5.1.1	ProteinID:CCB60592	ProteinID:CCB60592.1
ncoils:Coil	UniProt:F6I0X6	EMBL:FN596508	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006694	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259
InterPro:IPR030384	EntrezGene:LOC100262458	wikigene:LOC100262458	InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241
PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44742	PANTHER:PTHR44742:SF1	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
InterPro:Sterol_MeTrfase_C	TMHMM:TMhelix	UniParc:UPI00015C85AC	ArrayExpress:VIT_03s0038g02920	EnsemblPlantsGene:VIT_03s0038g02920	EnsemblPlants:VIT_03s0038g02920.t01
unigene:Vvi.8246	RefSeq:XP_002280693	RefSeq:XP_002280693.1	:	:	:

Description

Methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I0X6]

Coordinates

chr3:-:2054681..2055826

Molecular Weight (calculated)

39868.8 Da

IEP (calculated)

6.950

GRAVY (calculated)

-0.180

Length

356 amino acids

Sequence
(BLAST)

001: MDSLALFCTA SLVAGGVYWF VFLLGAAERK GKRAVHLSGG SISGDKVRDN YKQYWSFFRR PKEIETAEKV PAFVDTFYNL VTDIYEWGWG QSFHFSPSVA
101: GKSHRDATRV HEEMAADLLG IRAGDRVLDA GCGVGGPMRA IARHSGANVV GITINEYQVN RAHLHNKKAG LESQCEVVCG NFLEMPFPDN SFDGAYSIEA
201: TCHAPKLEEV YSEIFRVLKP GSMYVSYEWV TTELYREDDA EHVEIIQGIE RGDALPGLRS YRDIVEIARK VGFEVVKEKD LAKPPAGPWW ARLKMGRIAY
301: WRNHILVTVL GWLGIAPKGV VDVHEMLFKT ADYLTRGGET GIFTPMHMIL CRKPES

Best Arabidopsis Sequence Match ( AT1G20330.1 )
(BLAST)

001: MDSLTLFFTG ALVAVGIYWF LCVLGPAERK GKRAVDLSGG SISAEKVQDN YKQYWSFFRR PKEIETAEKV PDFVDTFYNL VTDIYEWGWG QSFHFSPSIP
101: GKSHKDATRL HEEMAVDLIQ VKPGQKILDV GCGVGGPMRA IASHSRANVV GITINEYQVN RARLHNKKAG LDALCEVVCG NFLQMPFDDN SFDGAYSIEA
201: TCHAPKLEEV YAEIYRVLKP GSMYVSYEWV TTEKFKAEDD EHVEVIQGIE RGDALPGLRA YVDIAETAKK VGFEIVKEKD LASPPAEPWW TRLKMGRLAY
301: WRNHIVVQIL SAVGVAPKGT VDVHEMLFKT ADYLTRGGET GIFSPMHMIL CRKPESPEES S

Arabidopsis Description

SMT224-methylenesterol C-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39227]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.