Factsheet for VIT_13s0064g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32972	Soybean	cytosol	72.99	88.24
KRH13976	Soybean	endoplasmic reticulum	72.99	88.24
Bra006211.1-P	Field mustard	cytosol	71.78	86.26
AT5G13710.1	Thale cress	cytosol	69.83	85.42
KRH23899	Soybean	cytosol	69.83	84.41
GSMUA_Achr3P29670_001	Banana	cytosol	68.86	82.03
VIT_08s0007g08470.t01	Wine grape	cytosol	68.13	81.63
KXG22604	Sorghum	cytosol	67.88	81.1
KXG34662	Sorghum	cytosol	67.4	80.52
Os07t0206700-01	Rice	cytosol, plasma membrane	67.15	80.23
TraesCS4B01G340700.1	Wheat	golgi	66.91	79.94
TraesCS4D01G336800.1	Wheat	cytosol	66.91	79.94
TraesCS5A01G510200.1	Wheat	cytosol	66.91	79.94
PGSC0003DMT400017668	Potato	cytosol	67.15	79.77
GSMUA_Achr4P03610_001	Banana	cytosol	66.91	79.71
KRH23897	Soybean	endoplasmic reticulum	65.45	79.12
CDX91102	Canola	mitochondrion, plastid	70.07	75.59
GSMUA_Achr4P13850_001	Banana	cytosol	61.56	74.85
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	67.88	72.47
HORVU4Hr1G084000.2	Barley	plastid	68.61	68.78
Zm00001d019139_P013	Maize	cytosol	61.07	60.19
VIT_03s0038g02920.t01	Wine grape	extracellular	34.06	39.33
VIT_18s0001g00810.t01	Wine grape	plasma membrane	33.33	38.06
VIT_16s0039g01410.t01	Wine grape	plastid	16.06	19.13

Protein Annotations

EntrezGene:100263590	wikigene:100263590	Gene3D:3.40.50.150	MapMan:5.5.1.1	ProteinID:CCB49529	ProteinID:CCB49529.1
UniProt:F6HBC7	EMBL:FN595509	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0003838
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783
GO:GO:0006629	GO:GO:0006694	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008757	GO:GO:0009058	GO:GO:0009506	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0016126	GO:GO:0016740	GO:GO:0032259	InterPro:IPR030384	EntrezGene:LOC100263590	wikigene:LOC100263590
InterPro:MeTrfase_SMT	InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068
PANTHER:PTHR44068:SF3	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	TIGR:TC61149	TIGR:TC66653
UniParc:UPI000210A9F2	ArrayExpress:VIT_13s0064g00440	EnsemblPlantsGene:VIT_13s0064g00440	EnsemblPlants:VIT_13s0064g00440.t01	unigene:Vvi.12671	RefSeq:XP_002276734
RefSeq:XP_002276734.1	RefSeq:XP_002276734.2	RefSeq:XP_003633564	RefSeq:XP_003633564.1	SEG:seg	:

Description

Methyltransferase [Source:UniProtKB/TrEMBL;Acc:F6HBC7]

Coordinates

chr13:-:22063688..22069529

Molecular Weight (calculated)

45948.9 Da

IEP (calculated)

6.828

GRAVY (calculated)

-0.255

Length

411 amino acids

Sequence
(BLAST)

001: MPTWQTHEPC HPFVVSLKPT HLCAVLPPFL SRFTPSLSNS LSLSLGFPSR SSLSTFAEMS KAGALDLASG VGGKIQKDEV LSAVEKYEKY HVCYGGEEEE
101: RKANYSDMVN KYYDLVTSFY EFGWGESFHF APRWKGESLR ESIRRHEHFL ALQLGVKPGQ KVLDVGCGIG GPLREIARFS STSVTGLNNN EYQITRGREL
201: NCIAGVDKTC DFVKADFMKM PFSDNTFDAV YAIEATCHAP DALGCYKEIY RVLKPGQCFA AYEWCMTDAF DPNNQEHQKI KAEIEIGDGL PDIRLTRQCL
301: EALKQAGFEV IWEKDLAVGS PLPWYLPLDK SHFSLSSFRL TAVGRFITKN MVKALEFVGL APKGSQRVQA FLEKAAEGLV DGGKKEIFTP MYFFLARKPN
401: SDGQLCGSWT Q

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.