Factsheet for GSMUA_Achr4P13850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P29670_001	Banana	cytosol	81.66	80.0
GSMUA_Achr4P03610_001	Banana	cytosol	80.77	79.13
KXG34662	Sorghum	cytosol	73.67	72.38
KXG22604	Sorghum	cytosol	73.08	71.8
Bra006211.1-P	Field mustard	cytosol	72.49	71.64
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	81.36	71.43
TraesCS5A01G510200.1	Wheat	cytosol	72.19	70.93
TraesCS4D01G336800.1	Wheat	cytosol	72.19	70.93
TraesCS4B01G340700.1	Wheat	golgi	72.19	70.93
AT5G13710.1	Thale cress	cytosol	70.12	70.54
Os07t0206700-01	Rice	cytosol, plasma membrane	71.6	70.35
KRH13976	Soybean	endoplasmic reticulum	70.71	70.29
KRH23899	Soybean	cytosol	70.41	70.0
VIT_08s0007g08470.t01	Wine grape	cytosol	71.01	69.97
KRH32972	Soybean	cytosol	70.12	69.71
PGSC0003DMT400017668	Potato	cytosol	70.41	68.79
Solyc01g087560.2.1	Tomato	cytosol	69.82	68.21
KRH23897	Soybean	endoplasmic reticulum	67.16	66.76
VIT_13s0064g00440.t01	Wine grape	plastid	74.85	61.56
CDX91102	Canola	mitochondrion, plastid	68.64	60.89
HORVU4Hr1G084000.2	Barley	plastid	73.08	60.24
Zm00001d019139_P013	Maize	cytosol	67.16	54.44
GSMUA_Achr4P25540_001	Banana	cytosol	20.12	38.86
GSMUA_Achr4P29480_001	Banana	cytosol	18.93	35.96
GSMUA_Achr1P27850_001	Banana	plastid	17.16	16.71

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:GSMUA_Achr4G13850_001	EnsemblPlants:GSMUA_Achr4P13850_001	EnsemblPlants:GSMUA_Achr4T13850_001	InterPro:IPR030384	UniProt:M0SNQ0	InterPro:MeTrfase_SMT
InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF3
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI000294DB00	:	:

Description

Cycloartenol-C-24-methyltransferase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G13850_001]

Coordinates

chr4:-:10358758..10362647

Molecular Weight (calculated)

37593.8 Da

IEP (calculated)

7.191

GRAVY (calculated)

-0.241

Length

338 amino acids

Sequence
(BLAST)

001: MSKSGAMDLA TRVGGSIKKE DVQSAVDRYE KYHVCFGGEE ETRKANYSDM VNKYYDLATS FYEFGWGQWK GESLGESIKR HEHFIALQLG LKPGMKVLDV
101: GSGIGGPLRE IARFSLTSVT GINNNEYQIS RGEELNRLAG LSHSCNFVKA DFLKMPFSDN EFDGIYAFDA LCHAPDPVAC YREICRVLKP GQCFAASEWF
201: MTDHFDPNNQ SHQKIKAEIE LGNGLPDIKT TRECVDALKL AGFEVVWARD LAVGSPIPWY SPLDVNRFSL SGFRLTAFGR GITRAMVKAL EFVRIAPAGS
301: ARVSSFLETA AEGLVEGGRK EIFTPIHFFL ARKPLSRS

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.