Factsheet for GSMUA_Achr3P29670_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P03610_001	Banana	cytosol	92.46	92.46
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	93.91	84.16
GSMUA_Achr4P13850_001	Banana	cytosol	80.0	81.66
KXG34662	Sorghum	cytosol	79.71	79.94
KXG22604	Sorghum	cytosol	79.71	79.94
KRH32972	Soybean	cytosol	77.97	79.12
TraesCS5A01G510200.1	Wheat	cytosol	78.84	79.07
TraesCS4D01G336800.1	Wheat	cytosol	78.84	79.07
TraesCS4B01G340700.1	Wheat	golgi	78.84	79.07
KRH13976	Soybean	endoplasmic reticulum	77.68	78.82
Os07t0206700-01	Rice	cytosol, plasma membrane	78.55	78.78
Bra006211.1-P	Field mustard	cytosol	77.39	78.07
KRH23899	Soybean	cytosol	76.23	77.35
VIT_08s0007g08470.t01	Wine grape	cytosol	76.52	76.97
AT5G13710.1	Thale cress	cytosol	74.78	76.79
PGSC0003DMT400017668	Potato	cytosol	76.52	76.3
Solyc01g087560.2.1	Tomato	cytosol	75.94	75.72
KRH23897	Soybean	endoplasmic reticulum	70.43	71.47
VIT_13s0064g00440.t01	Wine grape	plastid	82.03	68.86
CDX91102	Canola	mitochondrion, plastid	73.91	66.93
HORVU4Hr1G084000.2	Barley	plastid	79.42	66.83
Zm00001d019139_P013	Maize	cytosol	73.04	60.43
GSMUA_Achr4P25540_001	Banana	cytosol	20.58	40.57
GSMUA_Achr4P29480_001	Banana	cytosol	19.71	38.2
GSMUA_Achr1P27850_001	Banana	plastid	16.81	16.71

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:GSMUA_Achr3G29670_001	EnsemblPlants:GSMUA_Achr3P29670_001	EnsemblPlants:GSMUA_Achr3T29670_001	InterPro:IPR030384	UniProt:M0SIY3	InterPro:MeTrfase_SMT
InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF3
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI00029677C2	:	:

Description

Cycloartenol-C-24-methyltransferase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G29670_001]

Coordinates

chr3:-:28726533..28733463

Molecular Weight (calculated)

38595.8 Da

IEP (calculated)

5.948

GRAVY (calculated)

-0.306

Length

345 amino acids

Sequence
(BLAST)

001: MSKSGALDLA SGVGGKIKKE DVQSAVDQYE KYHVCYGGDE ETRKANYSDM VNKYYDLATS FYEFGWGESF HFAPRWKGES LRESIKRHEH FLALQMGLKP
101: GMKVLDVGCG IGGPLREIAR FSSTSITGLN NNEYQISRGT ELNRIAGVSE SCDFVKADFM KMPFSDNTFD GIYAIEATCH APDAVGCYKE IYRVLKPGQC
201: FAAYEWCMTD HFDPNNESHN KTKAEIELGN GLPDIRTTRE CLDALKLAGF EVVWEKDLAV DSPVSWYLPL DTSKFSITSF RLTAFGRFVT RTMVKTLEFV
301: GIAPAGSNRV SSFLEKAAEG LVEGGRKEIF TPMYFFLVRK PLADS

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.