Factsheet for GSMUA_Achr4P03610_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P29670_001	Banana	cytosol	92.46	92.46
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	91.01	81.56
GSMUA_Achr4P13850_001	Banana	cytosol	79.13	80.77
KXG34662	Sorghum	cytosol	78.55	78.78
KXG22604	Sorghum	cytosol	78.55	78.78
TraesCS5A01G510200.1	Wheat	cytosol	77.97	78.2
TraesCS4D01G336800.1	Wheat	cytosol	77.97	78.2
TraesCS4B01G340700.1	Wheat	golgi	77.97	78.2
KRH32972	Soybean	cytosol	76.81	77.94
Os07t0206700-01	Rice	cytosol, plasma membrane	77.68	77.91
Bra006211.1-P	Field mustard	cytosol	77.1	77.78
KRH13976	Soybean	endoplasmic reticulum	76.52	77.65
AT5G13710.1	Thale cress	cytosol	75.36	77.38
KRH23899	Soybean	cytosol	75.94	77.06
VIT_08s0007g08470.t01	Wine grape	cytosol	76.52	76.97
PGSC0003DMT400017668	Potato	cytosol	75.94	75.72
Solyc01g087560.2.1	Tomato	cytosol	75.65	75.43
KRH23897	Soybean	endoplasmic reticulum	70.43	71.47
VIT_13s0064g00440.t01	Wine grape	plastid	79.71	66.91
CDX91102	Canola	mitochondrion, plastid	73.33	66.4
HORVU4Hr1G084000.2	Barley	plastid	78.55	66.1
Zm00001d019139_P013	Maize	cytosol	71.59	59.23
GSMUA_Achr4P25540_001	Banana	cytosol	20.58	40.57
GSMUA_Achr4P29480_001	Banana	cytosol	19.71	38.2
GSMUA_Achr1P27850_001	Banana	plastid	17.39	17.29

Protein Annotations

Gene3D:3.40.50.150	MapMan:5.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0006694
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:GSMUA_Achr4G03610_001	EnsemblPlants:GSMUA_Achr4P03610_001	EnsemblPlants:GSMUA_Achr4T03610_001	InterPro:IPR030384	UniProt:M0SKS8	InterPro:MeTrfase_SMT
InterPro:Methyltransf_11	PFAM:PF08241	PFAM:PF08498	PFscan:PS51685	PANTHER:PTHR44068	PANTHER:PTHR44068:SF3
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	InterPro:Sterol_MeTrfase_C	UniParc:UPI00029567CE	:	:

Description

Cycloartenol-C-24-methyltransferase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G03610_001]

Coordinates

chr4:+:2873405..2881021

Molecular Weight (calculated)

38535.9 Da

IEP (calculated)

6.624

GRAVY (calculated)

-0.314

Length

345 amino acids

Sequence
(BLAST)

001: MSKSGALDLA TGVGGKIKKE DVQSAVEQYE KYHVCFGGGE ETRKANYSDM VNKYYDLATS FYEFGWGESF HFAPRWKGES LRESIKRHEH FLALQLGLKP
101: GMKVLDVGCG IGGPLREIAR FSSTSITGLN NNEYQISRGR ELNRVAGLSE SCNFVKADFM KMPFPDNSFD GIYAIEATCH APDAVGCYKE IYRVLKPGQR
201: FAVYEWCMTD HFDPDNESHQ KTKAEIELGN GLPDIRTTKQ CLDALKLAGF EVISEKDLAA DSPVSWYLPL DTSQFSITSF RLTSFGRFIT RTMVKTLEFV
301: GIAPAGSNRV SSFLEKAAEG LVEGGRKEIF TPMCFFLVRK PLSES

Best Arabidopsis Sequence Match ( AT5G13710.1 )
(BLAST)

001: MDLASNLGGK IDKSDVLTAV EKYEQYHVFH GGNEEERKAN YTDMVNKYYD LATSFYEYGW GESFHFAQRW KGESLRESIK RHEHFLALQL GIQPGQKVLD
101: VGCGIGGPLR EIARFSNSVV TGLNNNEYQI TRGKELNRLA GVDKTCNFVK ADFMKMPFPE NSFDAVYAIE ATCHAPDAYG CYKEIYRVLK PGQCFAAYEW
201: CMTDAFDPDN AEHQKIKGEI EIGDGLPDIR LTTKCLEALK QAGFEVIWEK DLAKDSPVPW YLPLDKNHFS LSSFRLTAVG RFITKNMVKI LEYIRLAPQG
301: SQRVSNFLEQ AAEGLVDGGR REIFTPMYFF LARKPE

Arabidopsis Description

SMT1Cycloartenol-C-24-methyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9LM02]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.