Factsheet for GSMUA_Achr1P27850_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23974	Soybean	cytosol	62.54	73.31
KRH39821	Soybean	cytosol	63.69	73.18
PGSC0003DMT400006168	Potato	cytosol	61.96	69.35
VIT_16s0039g01410.t01	Wine grape	plastid	66.86	67.25
Bra022503.1-P	Field mustard	cytosol	51.01	67.05
CDX91533	Canola	cytosol	50.72	66.67
TraesCS6A01G269700.1	Wheat	plastid	69.16	65.57
KRH23976	Soybean	plastid	65.99	65.43
TraesCS6D01G245200.1	Wheat	plastid	68.59	65.21
Bra008507.1-P	Field mustard	cytosol	57.64	64.94
HORVU6Hr1G068410.1	Barley	plastid	68.3	64.23
Os02t0701600-01	Rice	plastid	65.99	63.26
Zm00001d017746_P001	Maize	plastid	63.98	63.07
OQU83859	Sorghum	cytosol	54.76	62.71
KXG30932	Sorghum	plastid	64.27	62.64
Solyc08g076360.2.1	Tomato	plastid	65.13	61.25
AT1G64970.1	Thale cress	plastid	60.81	60.63
TraesCS6B01G297000.1	Wheat	plastid	65.99	60.42
CDY56135	Canola	plastid	60.23	60.23
CDY37556	Canola	plastid	60.23	60.23
CDY16380	Canola	plastid	60.81	59.94
KXG22885	Sorghum	endoplasmic reticulum	54.18	55.46
GSMUA_Achr4P25540_001	Banana	cytosol	10.09	20.0
GSMUA_Achr4P29480_001	Banana	cytosol	10.09	19.66
GSMUA_Achr4P03610_001	Banana	cytosol	17.29	17.39
GSMUA_Achr4P13850_001	Banana	cytosol	16.71	17.16
GSMUA_Achr3P29670_001	Banana	cytosol	16.71	16.81
GSMUA_Achr7P27090_001	Banana	endoplasmic reticulum, golgi	17.29	15.58

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0010189	GO:GO:0016740	GO:GO:0032259
GO:GO:0050342	GO:GO:0051741	EnsemblPlantsGene:GSMUA_Achr1G27850_001	EnsemblPlants:GSMUA_Achr1P27850_001	EnsemblPlants:GSMUA_Achr1T27850_001	InterPro:IPR025774
UniProt:M0S3P2	InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241	PFscan:PS51581	PANTHER:PTHR43591
PANTHER:PTHR43591:SF25	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000295503B	SEG:seg	:

Description

Tocopherol O-methyltransferase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G27850_001]

Coordinates

chr1:+:26416415..26425857

Molecular Weight (calculated)

38078.7 Da

IEP (calculated)

7.223

GRAVY (calculated)

-0.151

Length

347 amino acids

Sequence
(BLAST)

001: MAARLHGHAS ELPSLPLRLS ASRSCLLGAA NRPPSALRLR PKSCRPARVM AAAASATAEE GLKKGIAEFY DQSSGLWEDI WGDHMHHGFY DPGVTASVDD
101: HRAAQIRMVE EALRFSGVSD DPSKKPKKVV DVGCGIGGSS RYLAKKFEAQ CQGITLSPVQ AQRAHNLSVV EGLADRVTFQ VADALEQPFS DGQFDLVWSM
201: ESGEHMPDKK KFVGELARVA APGATIIIVT WCHRDLLPSE DTLLPEELNL LNKICDAYYL PSWCSAADYI EIAQSLSLEN IKTADWSENV APFWPAVIRS
301: ALTWRGFTSL LQSGWKTIKG ALAMPLMIEG YNKKLIKFAI ITCRKPE

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.