Factsheet for Os02t0701600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 17189339

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83859	Sorghum	cytosol	63.26	75.58
KXG30932	Sorghum	plastid	74.31	75.56
TraesCS6A01G269700.1	Wheat	plastid	75.41	74.59
HORVU6Hr1G068410.1	Barley	plastid	75.69	74.25
TraesCS6D01G245200.1	Wheat	plastid	74.86	74.25
Zm00001d017746_P001	Maize	plastid	71.27	73.3
Bra022503.1-P	Field mustard	cytosol	52.49	71.97
KRH23974	Soybean	cytosol	58.56	71.62
CDX91533	Canola	cytosol	51.93	71.21
KRH39821	Soybean	cytosol	58.56	70.2
TraesCS6B01G297000.1	Wheat	plastid	72.93	69.66
PGSC0003DMT400006168	Potato	cytosol	58.56	68.39
Bra008507.1-P	Field mustard	cytosol	56.91	66.88
GSMUA_Achr1P27850_001	Banana	plastid	63.26	65.99
VIT_16s0039g01410.t01	Wine grape	plastid	62.15	65.22
KRH23976	Soybean	plastid	61.33	63.43
KXG22885	Sorghum	endoplasmic reticulum	59.12	63.13
CDY37556	Canola	plastid	60.22	62.82
CDY56135	Canola	plastid	59.67	62.25
CDY16380	Canola	plastid	60.5	62.22
AT1G64970.1	Thale cress	plastid	58.84	61.21
Solyc08g076360.2.1	Tomato	plastid	61.6	60.43
Os11t0296900-00	Rice	cytosol	12.71	24.21
Os03t0807600-00	Rice	plasma membrane	14.92	20.69
Os07t0206700-01	Rice	cytosol, plasma membrane	18.23	19.19
Os03t0136200-01	Rice	extracellular	17.4	17.36

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	EntrezGene:4330437	EMBL:AK061746	EMBL:AK071763	ProteinID:BAD07529.1
ProteinID:BAF09758.1	ProteinID:BAS80471.1	EMBL:DQ456878	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0010189	GO:GO:0016740
GO:GO:0032259	GO:GO:0050342	InterPro:IPR025774	InterPro:MTs_g-TMT	InterPro:Methyltransf_11	EnsemblPlantsGene:Os02g0701600
EnsemblPlants:Os02t0701600-01	PFAM:PF08241	PFscan:PS51581	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25	UniProt:Q6ZIK0
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000023670F	RefSeq:XP_015623086.1	SEG:seg	:

Description

VITAMIN E DEFICIENT 4, gamma tocopherol methyltransferaseSimilar to Tocopherol O-methyltransferase, chloroplast precursor (EC 2.1.1.95) (Gamma-tocopherol methyltransferase). (Os02t0701600-01)

Coordinates

chr2:+:28894065..28897418

Molecular Weight (calculated)

39673.5 Da

IEP (calculated)

8.164

GRAVY (calculated)

-0.251

Length

362 amino acids

Sequence
(BLAST)

001: MAHAAAATGA LAPLHPLLRC TSRHLCASAS PRAGLCLHHH RRRRRSSRRT KLAVRAMAPT LSSSSTAAAA PPGLKEGIAG LYDESSGVWE SIWGEHMHHG
101: FYDAGEAASM SDHRRAQIRM IEESLAFAAV PDDAEKKPKS VVDVGCGIGG SSRYLANKYG AQCYGITLSP VQAERGNALA AEQGLSDKVS FQVGDALEQP
201: FPDGQFDLVW SMESGEHMPD KRQFVSELAR VAAPGARIII VTWCHRNLEP SEESLKPDEL NLLKRICDAY YLPDWCSPSD YVKIAESLSL EDIRTADWSE
301: NVAPFWPAVI KSALTWKGLT SLLRSGWKTI RGAMVMPLMI EGYKKGLIKF TIITCRKPET TQ

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.