Factsheet for HORVU6Hr1G068410.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G269700.1	Wheat	plastid	86.99	87.7
TraesCS6D01G245200.1	Wheat	plastid	85.91	86.85
TraesCS6B01G297000.1	Wheat	plastid	81.03	78.89
Os02t0701600-01	Rice	plastid	74.25	75.69
KXG30932	Sorghum	plastid	72.09	74.72
KRH23974	Soybean	cytosol	59.08	73.65
OQU83859	Sorghum	cytosol	60.43	73.6
Zm00001d017746_P001	Maize	plastid	70.19	73.58
KRH39821	Soybean	cytosol	59.62	72.85
PGSC0003DMT400006168	Potato	cytosol	59.89	71.29
Bra022503.1-P	Field mustard	cytosol	49.86	69.7
CDX91533	Canola	cytosol	49.59	69.32
GSMUA_Achr1P27850_001	Banana	plastid	64.23	68.3
VIT_16s0039g01410.t01	Wine grape	plastid	62.33	66.67
Bra008507.1-P	Field mustard	cytosol	54.74	65.58
KRH23976	Soybean	plastid	61.25	64.57
KXG22885	Sorghum	endoplasmic reticulum	57.45	62.54
Solyc08g076360.2.1	Tomato	plastid	62.33	62.33
CDY37556	Canola	plastid	57.18	60.81
AT1G64970.1	Thale cress	plastid	57.18	60.63
CDY16380	Canola	plastid	57.72	60.51
CDY56135	Canola	plastid	56.64	60.23
HORVU5Hr1G109840.6	Barley	cytosol	14.91	18.58
HORVU1Hr1G052620.1	Barley	endoplasmic reticulum	17.34	17.63
HORVU4Hr1G080780.1	Barley	endoplasmic reticulum, extracellular	17.34	17.25
HORVU4Hr1G084000.2	Barley	plastid	16.8	15.12

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	EMBL:AK355075	EMBL:AK369125	UniProt:F2CTX3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987
GO:GO:0010189	GO:GO:0016740	GO:GO:0032259	GO:GO:0050342	GO:GO:0051741	EnsemblPlantsGene:HORVU6Hr1G068410
EnsemblPlants:HORVU6Hr1G068410.1	InterPro:IPR025774	InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241	PFscan:PS51581
PANTHER:PTHR43591	PANTHER:PTHR43591:SF25	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0002004F0E	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CTX3]

Coordinates

chrchr6H:+:474017733..474020674

Molecular Weight (calculated)

40050.8 Da

IEP (calculated)

6.861

GRAVY (calculated)

-0.203

Length

369 amino acids

Sequence
(BLAST)

001: MENSAALLHS LLLSTSWTPR RRLDRALATP TRLAPPAGPL CRSRRPTRSV RPMVSSTTAA RADAAPPGLK EGIAGLYDES SGLWESIWGE HMHHGFYDSG
101: EAASMSDHRR AQIRMIEEAL AFAAVPDDPT NKPKTIVDVG CGIGGSSRYL ANKYGAQCSG ITLSPVQAER GNALAAAQGL ADKASFQVAD ALEQPFPDGQ
201: FDLVWSMESG EHMPNKQKFV GELARVAAPG ATIIIVTWCH RNLALSEDSL KPDELNLLKK ICDAYYLPDW CSPSDYVKIA ESLSLEDIKT ADWSENVAPF
301: WPAVIQSALT WKGLTSLLRS GWKTIKGALV MPLMIQGYKK GLIKFTIITC RKPQAVTEGE AETASPSVE

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.