CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022503.1-P	Field mustard	cytosol	99.24	99.24
CDY37556	Canola	plastid	92.42	70.32
CDY16380	Canola	plastid	93.56	70.17
CDY56135	Canola	plastid	91.67	69.74
AT1G64970.1	Thale cress	plastid	88.26	66.95
KRH23974	Soybean	cytosol	71.21	63.51
KRH39821	Soybean	cytosol	71.97	62.91
PGSC0003DMT400006168	Potato	cytosol	69.32	59.03
KRH23976	Soybean	plastid	71.97	54.29
VIT_16s0039g01410.t01	Wine grape	plastid	70.83	54.2
OQU83859	Sorghum	cytosol	61.74	53.8
Os02t0701600-01	Rice	plastid	71.21	51.93
Zm00001d017746_P001	Maize	plastid	68.56	51.42
KXG30932	Sorghum	plastid	68.94	51.12
GSMUA_Achr1P27850_001	Banana	plastid	66.67	50.72
TraesCS6D01G245200.1	Wheat	plastid	69.7	50.41
TraesCS6A01G269700.1	Wheat	plastid	69.7	50.27
HORVU6Hr1G068410.1	Barley	plastid	69.32	49.59
Solyc08g076360.2.1	Tomato	plastid	69.32	49.59
TraesCS6B01G297000.1	Wheat	plastid	68.18	47.49
KXG22885	Sorghum	endoplasmic reticulum	60.61	47.2
CDY51340	Canola	extracellular	24.24	17.98
CDY71885	Canola	extracellular	24.24	17.98
CDX87642	Canola	endoplasmic reticulum, extracellular, plasma membrane	22.35	16.34
CDX73228	Canola	endoplasmic reticulum, extracellular, plasma membrane	21.97	16.11
CDX91102	Canola	mitochondrion, plastid	20.83	14.44

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	GO:A0A078DWG2	EnsemblPlants:CDX91533	ProteinID:CDX91533	ProteinID:CDX91533.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740
GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00152914001	InterPro:IPR025774	InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241
PFscan:PS51581	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniPathway:UPA00160
UniParc:UPI0004EE2CBB	:	:	:	:	:

Description

BnaC02g16270D

Coordinates

chrLK031868:+:161289..163303

Molecular Weight (calculated)

29350.5 Da

IEP (calculated)

7.074

GRAVY (calculated)

-0.093

Length

264 amino acids

Sequence
(BLAST)

001: MHHGFYDPDS SVQLSDSGHR EAQIRMIEES LRFAGVTEEE KKIKRVVDVG CGIGGSSRYI ASKFGAECIG ITLSPVQAKR ANDLATAQSL SHKVSFQVAD
101: ALEQPFEDGI FDLVWSMESG EHMPDKAKFV KELVRVAAPG GRIIIVTWCH RNLSQGEEAL QPWEQNLLDR ICKTFYLPAW CSTSDYVDLL QSLSLQDIKC
201: ADWSENVAPF WPAVIRTALT WKGLVSLLRS GMKSIKGALT MPLMIEGYKK GVIKFGIITC QKPL

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.