Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022503.1-P | Field mustard | cytosol | 67.24 | 88.64 |
| CDX91533 | Canola | cytosol | 66.95 | 88.26 |
| Bra008507.1-P | Field mustard | cytosol | 76.44 | 86.36 |
| CDY37556 | Canola | plastid | 79.89 | 80.12 |
| CDY56135 | Canola | plastid | 79.31 | 79.54 |
| CDY16380 | Canola | plastid | 80.17 | 79.26 |
| KRH23974 | Soybean | cytosol | 61.78 | 72.64 |
| KRH39821 | Soybean | cytosol | 62.64 | 72.19 |
| PGSC0003DMT400006168 | Potato | cytosol | 58.91 | 66.13 |
| VIT_16s0039g01410.t01 | Wine grape | plastid | 62.93 | 63.48 |
| KRH23976 | Soybean | plastid | 63.51 | 63.14 |
| GSMUA_Achr1P27850_001 | Banana | plastid | 60.63 | 60.81 |
| Os02t0701600-01 | Rice | plastid | 61.21 | 58.84 |
| Zm00001d017746_P001 | Maize | plastid | 58.62 | 57.95 |
| KXG30932 | Sorghum | plastid | 58.91 | 57.58 |
| TraesCS6D01G245200.1 | Wheat | plastid | 60.06 | 57.26 |
| HORVU6Hr1G068410.1 | Barley | plastid | 60.63 | 57.18 |
| TraesCS6A01G269700.1 | Wheat | plastid | 60.06 | 57.1 |
| Solyc08g076360.2.1 | Tomato | plastid | 60.34 | 56.91 |
| OQU83859 | Sorghum | cytosol | 49.43 | 56.77 |
| TraesCS6B01G297000.1 | Wheat | plastid | 59.2 | 54.35 |
| KXG22885 | Sorghum | endoplasmic reticulum | 50.86 | 52.21 |
| AT1G20330.1 | Thale cress | endoplasmic reticulum, golgi | 18.39 | 17.73 |
| AT1G76090.1 | Thale cress | endoplasmic reticulum, plasma membrane | 16.95 | 16.43 |
| AT5G13710.1 | Thale cress | cytosol | 15.8 | 16.37 |
Protein Annotations
| MapMan:10.3.2.6 | Gene3D:3.40.50.150 | EntrezGene:842805 | ProteinID:AAD38271.2 | ProteinID:AEE34310.1 | EMBL:AF104220 |
| ArrayExpress:AT1G64970 | EnsemblPlantsGene:AT1G64970 | RefSeq:AT1G64970 | TAIR:AT1G64970 | RefSeq:AT1G64970-TAIR-G | EnsemblPlants:AT1G64970.1 |
| TAIR:AT1G64970.1 | EMBL:AY049258 | EMBL:AY087138 | EMBL:AY090280 | Unigene:At.10960 | Symbol:G-TMT |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0010189 | GO:GO:0016740 | GO:GO:0032259 | GO:GO:0050342 | GO:GO:0051741 |
| InterPro:IPR025774 | InterPro:MTs_g-TMT | InterPro:Methyltransf_11 | RefSeq:NP_176677.1 | PFAM:PF08241 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51581 | PANTHER:PTHR43591 |
| PANTHER:PTHR43591:SF25 | UniProt:Q9ZSK1 | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | UniParc:UPI00000483F6 | SEG:seg |
Description
VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
Coordinates
chr1:-:24134085..24136109
Molecular Weight (calculated)
38077.5 Da
IEP (calculated)
7.191
GRAVY (calculated)
-0.164
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.