CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23974	Soybean	cytosol	88.08	89.86
KRH23976	Soybean	plastid	87.42	75.43
Bra022503.1-P	Field mustard	cytosol	63.58	72.73
PGSC0003DMT400006168	Potato	cytosol	74.5	72.58
CDX91533	Canola	cytosol	62.91	71.97
Bra008507.1-P	Field mustard	cytosol	70.2	68.83
VIT_16s0039g01410.t01	Wine grape	plastid	74.83	65.51
GSMUA_Achr1P27850_001	Banana	plastid	73.18	63.69
OQU83859	Sorghum	cytosol	63.24	63.04
CDY16380	Canola	plastid	73.18	62.78
AT1G64970.1	Thale cress	plastid	72.19	62.64
CDY37556	Canola	plastid	71.52	62.25
Solyc08g076360.2.1	Tomato	plastid	75.17	61.52
CDY56135	Canola	plastid	70.53	61.38
Zm00001d017746_P001	Maize	plastid	70.53	60.51
KXG30932	Sorghum	plastid	71.19	60.39
TraesCS6A01G269700.1	Wheat	plastid	73.18	60.38
TraesCS6D01G245200.1	Wheat	plastid	72.85	60.27
HORVU6Hr1G068410.1	Barley	plastid	72.85	59.62
Os02t0701600-01	Rice	plastid	70.2	58.56
TraesCS6B01G297000.1	Wheat	plastid	70.86	56.46
KXG22885	Sorghum	endoplasmic reticulum	60.26	53.69
KRH60980	Soybean	endoplasmic reticulum	22.52	18.84
KRH51652	Soybean	endoplasmic reticulum	22.19	18.46
KRH32972	Soybean	cytosol	20.2	17.94
KRH23897	Soybean	endoplasmic reticulum	20.2	17.94
KRH13976	Soybean	endoplasmic reticulum	19.87	17.65
KRH23899	Soybean	cytosol	19.54	17.35

Protein Annotations

MapMan:10.3.2.6	EntrezGene:100792443	Gene3D:3.40.50.150	EMBL:AB617795	EMBL:ACUP02005959	ProteinID:BAK57290.1
UniProt:F8WRI5	EnsemblPlantsGene:GLYMA_09G222800	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0010189	GO:GO:0016740	GO:GO:0032259
GO:GO:0051741	InterPro:IPR025774	EMBL:KM434769	EnsemblPlants:KRH39821	ProteinID:KRH39821	ProteinID:KRH39821.1
InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241	PFscan:PS51581	PANTHER:PTHR43591	PANTHER:PTHR43591:SF25
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI00021B7C4E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:44341683..44346020

Molecular Weight (calculated)

33312.9 Da

IEP (calculated)

6.783

GRAVY (calculated)

-0.175

Length

302 amino acids

Sequence
(BLAST)

001: MSVEQKAAGK EEEGKLQKGI AEFYDESSGI WENIWGDHMH HGFYDPDSTV SVSDHRAAQI RMIQESLRFA SLLSENPSKW PKSIVDVGCG IGGSSRYLAK
101: KFGATSVGIT LSPVQAQRAN SLAAAQGLAD KVSFEVADAL KQPFPDGKFD LVWSMESGEH MPDKAKFVGE LARVAAPGGT IIIVTWCHRD LGPDEQSLLP
201: WEQDLLKKIC DSYYLPAWCS TSDYVKLLES LSLQDIKSAD WSPFVAPFWP AVIRTALTWN GLTSLLRSGL KTIKGALAMP LMIKGYKKDL IKFSIITCRK
301: PE

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.