CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39821	Soybean	cytosol	89.86	88.08
KRH23976	Soybean	plastid	90.54	76.57
Bra022503.1-P	Field mustard	cytosol	64.19	71.97
PGSC0003DMT400006168	Potato	cytosol	75.0	71.61
CDX91533	Canola	cytosol	63.51	71.21
Bra008507.1-P	Field mustard	cytosol	71.28	68.51
VIT_16s0039g01410.t01	Wine grape	plastid	75.0	64.35
GSMUA_Achr1P27850_001	Banana	plastid	73.31	62.54
OQU83859	Sorghum	cytosol	63.85	62.38
AT1G64970.1	Thale cress	plastid	72.64	61.78
CDY37556	Canola	plastid	72.3	61.67
CDY16380	Canola	plastid	72.97	61.36
CDY56135	Canola	plastid	71.28	60.81
Solyc08g076360.2.1	Tomato	plastid	75.34	60.43
Zm00001d017746_P001	Maize	plastid	71.28	59.94
KXG30932	Sorghum	plastid	71.96	59.83
TraesCS6A01G269700.1	Wheat	plastid	73.65	59.56
TraesCS6D01G245200.1	Wheat	plastid	73.31	59.45
HORVU6Hr1G068410.1	Barley	plastid	73.65	59.08
Os02t0701600-01	Rice	plastid	71.62	58.56
TraesCS6B01G297000.1	Wheat	plastid	71.96	56.2
KXG22885	Sorghum	endoplasmic reticulum	61.82	53.98
KRH32972	Soybean	cytosol	20.61	17.94
KRH23897	Soybean	endoplasmic reticulum	20.61	17.94
KRH60980	Soybean	endoplasmic reticulum	21.62	17.73
KRH13976	Soybean	endoplasmic reticulum	20.27	17.65
KRH51652	Soybean	endoplasmic reticulum	21.62	17.63
KRH23899	Soybean	cytosol	19.26	16.76

Protein Annotations

MapMan:10.3.2.6	Gene3D:3.40.50.150	EMBL:ACUP02007164	EnsemblPlantsGene:GLYMA_12G014200	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009987	GO:GO:0010189
GO:GO:0016740	GO:GO:0032259	GO:GO:0051741	UniProt:I1LP31	InterPro:IPR025774	EnsemblPlants:KRH23974
ProteinID:KRH23974	ProteinID:KRH23974.1	InterPro:MTs_g-TMT	InterPro:Methyltransf_11	PFAM:PF08241	PFscan:PS51581
PANTHER:PTHR43591	PANTHER:PTHR43591:SF25	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000233CBB1	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:1025584..1029095

Molecular Weight (calculated)

32890.5 Da

IEP (calculated)

7.536

GRAVY (calculated)

-0.209

Length

296 amino acids

Sequence
(BLAST)

001: MAGKEEKEGK LQKGIAEFYD ESSGLWENIW GDHMHHGFYD PDSTVSLSDH RLAQIRMIQE SLRFASVSEE RSKWPKSIVD VGCGIGGSSR YLAKKFGATS
101: VGITLSPVQA QRANALAAAQ GLDDKVSFEV ADALKQPFPD GKFDLVWSME SGEHMPDKAK FVGELARVAA PGATIIIVTW CHRELGPDEQ SLHPWEQDLL
201: KKICDAYYLP AWCSASDYVK LLQSLSLQDI KSEDWSRFVA PFWPAVIRSA LTWNGLTSLL RSGLKAIKGA LAMPLMIKGY KKNLIKFAII TCRKPE

Best Arabidopsis Sequence Match ( AT1G64970.1 )
(BLAST)

001: MKATLAAPSS LTSLPYRTNS SFGSKSSLLF RSPSSSSSVS MTTTRGNVAV AAAATSTEAL RKGIAEFYNE TSGLWEEIWG DHMHHGFYDP DSSVQLSDSG
101: HKEAQIRMIE ESLRFAGVTD EEEEKKIKKV VDVGCGIGGS SRYLASKFGA ECIGITLSPV QAKRANDLAA AQSLAHKASF QVADALDQPF EDGKFDLVWS
201: MESGEHMPDK AKFVKELVRV AAPGGRIIIV TWCHRNLSAG EEALQPWEQN ILDKICKTFY LPAWCSTDDY VNLLQSHSLQ DIKCADWSEN VAPFWPAVIR
301: TALTWKGLVS LLRSGMKSIK GALTMPLMIE GYKKGVIKFG IITCQKPL

Arabidopsis Description

VTE4Tocopherol O-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.